Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1566 ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCAACTCACAGATTAAGGAGTGAAGCATCATCAGCACAGTTTCAAGCTTGTCATTTCCAGATACCATCAATGAGCGCACAGAGATTGGATTTACCTTGTAGCTTCCCGAGGAAAGACGGTTCTTCGCGTTCGCAGCAGCAGTTGAGGCCCGCGGGAATTTCGTTGGAGAAGCCTGAAGTCAAGAACAGCAACAACGGTAGTAGCGCGTGTTCTCTGCAGCAGAACATTCGGTTGCCGCCTTTAGCAACAACAGCACAGACATTGGGAGAGATTAAGGATGAGGAGTTTTGGGAGAAGGGTGGGAGGAGTTTGAAGAGGCTTGCAGAACATGGATCTTTGGAGGAGTCTTTTGCAAATAGAGTTAAGAGGAAAAAGGGTAATGGAGGTGATGAGAATTTTGAGGAATCTGAAAGGGATAGTTTCAGTTTGGCACAATTTGGTGCTGGAAACTTTTGGTCTGTTCATAGTTTTGGAGGTTTTAATAACCCTTCACTTCCTTTCTCTTTGAATTGTTCTGGAGATGAGGAAAGGGTTTGTTTTGCTCCTGCTGAAGTGGTTTCTGCACCTTTGCCTTTGTCCAACAATCCTTGGATTGAATCTGCTGTAACAACGATCACCAATTTCGGTGAGGGTAGCCACCAACATCAACATCATCATCATCATGTCAACGAAGGTTCAGTCTCCAATGATTCATCAGAAAGCCAGAGTTTGAGCCTGAGGTTGAATGAGAATGCATCAGAACATGGAGATGGTAATGGTTCAGGGAATCCTTATCAGCATGAAGGCACTGAAGTGGAGACAGGAGAAGAGGATGAAGAAGAGGAGCAACGCGGCTTTGAGCTTTTGAGCTTGCTTACCGGTTGTGTTGATGCTATTGGATCAAGGAATGTGGCCGCAATCAACCATTTCATTGCGAAATTGGGTGATCTTGCATCTCCAAGGGGAACTTCCATAAGCCGAATTTGTGCTTATTTTACAGAAGCCTTAGCCATCAGAGTCACCAGGCTTTGGCCTCATGTTTTTCACATCACTGCCACTTCTCGCGATTTCGACAGGGTGGTGGATGATGATGAAACTGTCACTGCGTTGAGGCTTCTAAACCAGGTTACCCCAATTCCCAAGTTTCTCCATTTCACATCAAATGAGATGCTGCTGAGGGCTTTTGAAGGGAAAGAAAGGGTTCACATTATAGACTTTGACATAAAGCAAGGACTTCAATGGCCTGGCTTGTTCCAAAGTTTAGCTTCAAGGACTAATCCTCCTAGCCATATTCGAATAACGGGCGTGGGGGAATCAAAGCAAGAGCTGAATGAAACCGGAGACAGGCTTGCTGGTTTCGCCGAGGCTTTGAACCTTCCTTTTGAGTTTCATCCAGTGGTGGACAGACTTGAAGATGTGAGGCTTTGGATGCTACATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTTTGCAGCTCCACAAGACCCTCCATGATGGCAGTGGAGGAGCATTGAGAGACTTTTTGGGTCTCATTCGCAGCACCAATCCTACAATTGTCGTTATTGCAGAACAAGAAGCGGAACACAACGAGGCGAGGCTGGACTCAAGAGTCTGCAATTCGTTGAAACATTACTCGGCGCTGTTTGATTCGATTGATCACAGTGGCCTTCCACTGGAGAGTCCAATGAGGATGAAGATAGAGGAGATGTTTGCTAGGGAGATAAGGAACATCATTGCTTGTGAAGGAAGGGACAGGTTAGAGAGGCACCAGAGTTTTGGAAATTGGAGGAAGATGATTGTGGAGCACGGAGGGTTCAGATGCATGGGAGTGACTGATAGGGAAATGATTCAAAGCCAGTTTCTGTTGAAGATGTATTCTTGTGAAAACTACAATATTCAGAAGCAGGATAATGAAGGAGCAACAGCACTTACTTTGGGTTGGCTTGATCAACCTCTCTATACCGTATCTTCATGGGCACCGGTCGATGTTGCTGGAAGCTCATCCTCTTTTTCTCAGCCAGCTTGA 2046 0.458 MLAGCSSSTLLSPTHRLRSEASSAQFQACHFQIPSMSAQRLDLPCSFPRKDGSSRSQQQLRPAGISLEKPEVKNSNNGSSACSLQQNIRLPPLATTAQTLGEIKDEEFWEKGGRSLKRLAEHGSLEESFANRVKRKKGNGGDENFEESERDSFSLAQFGAGNFWSVHSFGGFNNPSLPFSLNCSGDEERVCFAPAEVVSAPLPLSNNPWIESAVTTITNFGEGSHQHQHHHHHVNEGSVSNDSSESQSLSLRLNENASEHGDGNGSGNPYQHEGTEVETGEEDEEEEQRGFELLSLLTGCVDAIGSRNVAAINHFIAKLGDLASPRGTSISRICAYFTEALAIRVTRLWPHVFHITATSRDFDRVVDDDETVTALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPGLFQSLASRTNPPSHIRITGVGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLHDGSGGALRDFLGLIRSTNPTIVVIAEQEAEHNEARLDSRVCNSLKHYSALFDSIDHSGLPLESPMRMKIEEMFAREIRNIIACEGRDRLERHQSFGNWRKMIVEHGGFRCMGVTDREMIQSQFLLKMYSCENYNIQKQDNEGATALTLGWLDQPLYTVSSWAPVDVAGSSSSFSQPA* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1566 681 MobiDBLite consensus disorder prediction 48 85 - -
Psa4g1566 681 PANTHER SCARECROW-LIKE PROTEIN 28 6 670 IPR030027 -
Psa4g1566 681 MobiDBLite consensus disorder prediction 70 85 - -
Psa4g1566 681 ProSiteProfiles GRAS family profile. 284 666 IPR005202 -
Psa4g1566 681 MobiDBLite consensus disorder prediction 222 289 - -
Psa4g1566 681 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 670 IPR005202 -
Psa4g1566 681 MobiDBLite consensus disorder prediction 239 273 - -
Psa4g1566 681 Pfam GRAS domain family 294 665 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1566 Psa-Chr4 109211058 109214543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1566 1 666 GRAS Transcription Factor Family AT1G63100 54.649 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa4g1566 GRAS 4.2e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1566 - - tcc:18606459 924.85