Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1543 ATGTCATCATCCATTTGTCACATGTTAATATCACTTCTTATTGTTTCTCTGCAACATAGCCTTGCAATTAAACAGTCCTATATTGTATATTTAGGATCACATTCTTTCGGTCCAAATCCTTCATTAATTGATTCTGAATCTGTCACAAAGTCTCATTATGATTTACTTGGATCTTACCTTGGAAGTACTAAGAAGGCCAAAGAAGCAATAATTTACTCTTACAATAAATATATTAATGGCTTTGCTGCAATACTTGATGAAGATGAAGCAAAAGAGATTGCAAAACATCCAGATGTTGTATCAATGTTTTTAAGTAAAAGATATGAACTACATACAACCCAATCGTGGAATTTCCTTGGGTTAGAGGTGGACGGTGGATTTGGTACCGATTCAGTATGGAAAAAATCATTGGGTGAAGACATCATTATTGGAAATTTGGACACTGGTGTTTGGCCAGAATCCAAGAGTTTTAGTGATGAAGGGTATGGGCCAATTCCAAAGAAATGGAAAGGAATTTGTCAAGTTGCCAAAGGAAATCCAGATAAATTTTATTGCAACGGGAAACTCATTGGAGCAAAATATTTTTATAAAGGCTATCAGGAACATCCCGGACCGGCGAATGTAACCTTTAATAGCGCACGCGACTTCGATGGTCATGGCACACATACTTTATCAACTGCTGGGGGTAATTTTGTTGCTGGAGCCAATGTTTTAGGGTTTGGAAATGGAACAGCAAGTGGTGGATCACCAAAAGCAAGAGTTGCAAGCTATAAAATCTGTTGGGATGGATGTGATGAAGCTGATATTTTGGCTGGTTTTGAAGCTGCCATAAGTGACGGTGTTGATGTACTTTCTGTGTCTTTGGGTGGAATTTTTCCACAATTTGGTTCAGGCAATGCTATTTCTGTTGGTTCCTTCCATGCAATTGCCAACAACGTCATTGTTGTGGCTTCTGCAGGAAACTCAGGACCTTCAACCTCATCTGTAGTCAATATCGAACCATGGACTATCACAGTTGCTGCTAGCACAATTGATAGAGACTTCACAAGTTATGTTATTCTTGGTAACAAAAAACTATACAAGGGAGCTAGTCTTTCAGAGTTGGAATTACCACCTAACAAATCATATCCATTGATTGCCTCTGATTGCAAAGAAGGAACTCTTGCTAAACAAAACGTTAAAGGAAAAATAGTGGTATGTCGTCGAGGTGGGAGTGCTAGAGTTGACATGGGTGTGCAAGCTTCTCTTGCAGGTGCTATTGGATTGATATTGGCTAACGACAGGGATTCAGGGGATGGAGTTATAGCAGATCCTCATGTGCTTCCCGCTACAAATGTTGGCTTTGCAGATGGCAATGCCATTTTTAATTACATCGATCACACAAAGTCTCCTGTGGCTTACATTACTAAAGTTAAAATAGAATTGGACGTAAAGAACAATCCAACCATAAGTTCATTTTCGTCCAGAGGCCCAAATAAATTTTCTCCTACAATCCTTAAGGCAAATCCTTTTGATTATGGTGCTGGGCACATTCAACCTAATCTTGCAGTGGATCCTGGACTTGTATATGACCTTAATATTACTGATTATTTGAACTACTTATGTGGTGGTAAATTCCTTAGTGACGACTTTAAAGCGTTTTACGGAAAGCCTTACACTTGTCCAAAATCATTCAGTGTAGAAGATTTCAATTATCCATCCATCTCAATTTATGCAGCTAACGTTTATGTATACAAGTCTTTTAGTGTTACTCGTACGGTTACCAATGTCGGGCCCCCAAGTGAGTATAGAGCAAAGATCGACGAACCTCTACTATTTCATGTCACAGTTGAGCCTGAGATATTAAGATTTAAACATAAGGGTGAGAAAAAAGAGTTCAAGGTTACATTCACTTTGAAGCAGCGTAGTTATGTTATTAGTGAATTTGAATTCGGGAAGTTGACTTGGAGTGATGGAAAGCATCATGTTGGGACTCCAATTACAATATTGATGTAA 1995 0.385 MSSSICHMLISLLIVSLQHSLAIKQSYIVYLGSHSFGPNPSLIDSESVTKSHYDLLGSYLGSTKKAKEAIIYSYNKYINGFAAILDEDEAKEIAKHPDVVSMFLSKRYELHTTQSWNFLGLEVDGGFGTDSVWKKSLGEDIIIGNLDTGVWPESKSFSDEGYGPIPKKWKGICQVAKGNPDKFYCNGKLIGAKYFYKGYQEHPGPANVTFNSARDFDGHGTHTLSTAGGNFVAGANVLGFGNGTASGGSPKARVASYKICWDGCDEADILAGFEAAISDGVDVLSVSLGGIFPQFGSGNAISVGSFHAIANNVIVVASAGNSGPSTSSVVNIEPWTITVAASTIDRDFTSYVILGNKKLYKGASLSELELPPNKSYPLIASDCKEGTLAKQNVKGKIVVCRRGGSARVDMGVQASLAGAIGLILANDRDSGDGVIADPHVLPATNVGFADGNAIFNYIDHTKSPVAYITKVKIELDVKNNPTISSFSSRGPNKFSPTILKANPFDYGAGHIQPNLAVDPGLVYDLNITDYLNYLCGGKFLSDDFKAFYGKPYTCPKSFSVEDFNYPSISIYAANVYVYKSFSVTRTVTNVGPPSEYRAKIDEPLLFHVTVEPEILRFKHKGEKKEFKVTFTLKQRSYVISEFEFGKLTWSDGKHHVGTPITILM* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1543 664 CDD PA_subtilisin_like 351 468 - -
Psa4g1543 664 Pfam Fibronectin type-III domain 562 662 IPR041469 -
Psa4g1543 664 Pfam Peptidase inhibitor I9 26 111 IPR010259 -
Psa4g1543 664 SUPERFAMILY Subtilisin-like 127 493 IPR036852 GO:0004252|GO:0006508
Psa4g1543 664 SUPERFAMILY PA domain 390 460 IPR046450 -
Psa4g1543 664 Gene3D - 345 475 - -
Psa4g1543 664 Gene3D Peptidase S8/S53 domain 501 530 IPR036852 GO:0004252|GO:0006508
Psa4g1543 664 Gene3D Peptidase S8/S53 domain 140 500 IPR036852 GO:0004252|GO:0006508
Psa4g1543 664 Gene3D - 534 663 - -
Psa4g1543 664 Pfam Subtilase family 138 498 IPR000209 GO:0006508|GO:0008236
Psa4g1543 664 CDD Peptidases_S8_3 108 344 IPR034197 -
Psa4g1543 664 ProSiteProfiles Serine proteases, subtilase domain profile. 115 664 - -
Psa4g1543 664 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 500 661 - -
Psa4g1543 664 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 22 501 - -
Psa4g1543 664 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 501 IPR045051 -
Psa4g1543 664 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 500 661 IPR045051 -
Psa4g1543 664 Pfam PA domain 376 454 IPR003137 -
Psa4g1543 664 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 111 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1543 Psa-Chr4 107830890 107834058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1543 500 664 Subtilisin-like Serine Gene Family AT5G59810 44.578 5.07e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1543 - - vun:114175516 634.795