Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1542 ATGTACATGTTGTATCTGCAAATAAGATTGGTGAAGGTGGATTTGGGCCAGTATTCAGGGTGTGCTGTCAGACGGTATGTCATTGCTGTTAAACAGCTCTCCTCCAAATCAAAGCAAGGGAACCGCGAATTTGTTAACGAAATTGGAATGATATCTGCTTTGCAGCATCCAAAATTCTTGTTAAGCTCTACGCGCTGTTGCATTGAAGGAAAGCAGTTGCTACTGATATACAAATACATGGAGAACAACTGTCTTGGCCGTGCACTTTTTGGTCATCAGGAACAGAACTGCACTTGGATTGGCCTACAAGAATGA 315 0.4254 MYMLYLQIRLVKVDLGQYSGCAVRRYVIAVKQLSSKSKQGNREFVNEIGMISALQHPKFLLSSTRCCIEGKQLLLIYKYMENNCLGRALFGHQEQNCTWIGLQE* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1542 104 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 94 - -
Psa4g1542 104 Gene3D Phosphorylase Kinase; domain 1 16 81 - -
Psa4g1542 104 SUPERFAMILY Protein kinase-like (PK-like) 24 95 IPR011009 -
Psa4g1542 104 Pfam Protein tyrosine and serine/threonine kinase 23 97 IPR001245 GO:0004672|GO:0006468
Psa4g1542 104 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1542 Psa-Chr4 107081683 107082297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1542 18 95 Receptor kinase-like Gene Family AT1G53430 67.949 1.37e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g1542 PK_Tyr_Ser-Thr 4.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1542 - - csin:114317600 115.161