Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1534 ATGGCATCGTCCATCTGTCACATGTTAATATCACTTCTTCTTTTTGTTTTTCTGCAACATACCTTTGCAATTAAACAGTCCTATATTGTATACTTAGGATCACATTCTTTTGGTCCAAATCCTTCATTATTGGATTCTGAAATTGTCACAAACTCTCACTATGATTTACTTGGATCTTTCCTTGGAAGTACTGAGAAGGCAAAAGAAGCAATGATTTACTCTTACAATAAATATATTAATGGCTTTGCTGCAATGCTCGATGAAGATGAAGCAAAAGAGATTGCAAAACATCCAAATGTTGTATCATTGTTTTTGAATAAAAGATATGAATTACACACAACCCGGTCATGGGAATTTCTTGGATTAGAGAGGGGAGGTGTATATCCTACTGATTCAGTATGGAAAAAAACATTGGGTGAAGACATTATTATTGGAAATTTGGACACAGGTGTTTGGCCAGAATCAAAGAGTTTTAGTGATGAAGGGTATGGGCCAATTCCAAAGAAATGGAAAGGGATTTGTCAAGTTGCCAAAGGAAATCCAGATAAATTTTATTGCAACAGGAAGCTTATTGGAGCAAGATATTTTGCAAAAGGCTATATTTCAAAAGGAAAGCCAAATGTAACAATGGACAGCGCACGCGACACTGAAGGCCACGGAACACATACTTTATCAACTGCCGGAGGTAATTTTGTTGCCGGAGCCAATGTGTTTGGGTTTGGAAATGGAACCGCAAGTGGTGGATCACCAAAAGCAAGAGTTGCAGCCTATAAAGTCTGCTGGGATGGATGTTTTGATGTTGATATTTTGGCTGGTTTTGAGGCTGCCATAGCTGACGGTGTTGATGTACTTTCTGTCTCCTTGGGTGGAGATTTTCCATCAGAGTTTTTCGAAAGTGGTATTTCCATAGGTTCCTTCCATGCAATTGCTAACAACATCGTTGTTTTGGTTTCGGGAGGAAATTCAGGACCTCAACCCTCATCTGTAGCAAATTTGGAGCCATGGACTTTCACAGTTGCTGCTAGCACAGTTGATAGAGACTTCACAAGTTATGTCATTCTTGGTAACAAGAAAATATACAAGGGAGCTAGTCTGTCCGAGGTTGATTTATCTCGTAAATTGTATCCATTGATAAGTGGTGTAGATGCCAAATTAGATAATGTGTCTCCCGACTCTGCCTCTGTTTGCAAAGAAGGATCTCTTGACCCCAAAAAGGTTAAAGGAAAAATATTGGTATGTCTTCGAGGTGACACTGCTAGAGTTGACAAGGGCGTGCAAGCTTCTCGTGTAGGTGCTGTTGGAATGATTTTAGTTAACGACGAGGATTCAGGGAATGGAGTTATAGCAGATCCTCATGTGCTCCCCGCTACAAATGTTGGCTTTGCAGATGGAAGTGCCATTTTTAGTTACATCAATCGCACAAAGTCTCCTGTGGCTTACATTACTAATGTTAAAACACAATTGGGCGTAAAGAACACTCCAACTATAGCTTCATTTTCATCAAGAGCAACAACAAAAACCAACAACGGTGTGCAAATATTGGATTCGTCGCTTGAAAAGGCAACTCCTTTTGCATATGGTGCTGGGCATGTTCGACCTAATCTTGCCGTGGATCCTGGACTTGTATATGACTTGAATGTTACTGATTATTTGAACTACTTATGTGGCCGGGAATACACCAGTGACCAACTTAAAGTGTTCTACGGAAAACCTTACACTTGTCCAAAATCTTTTAGTTTAAAAGATTTCAACTATCCATCCATCACAGTTTATGATTTTAACAAAATTTGGAAGACTTTTAGTGTTACTCGGACGGTTACCAATGTCGGCCCCCCAAGTGAGTATAGAGCAAAGATCGAGGCTCCACCACAATTTCAAGTCGCAGTTGAGCCTGAGATATTAAGATTTAAACATAAGGGTGAGAAAAAAGAGTTCAAGGTTACATTCACTTTGAAGGCAGGTAGTAAATATGTTAGTGATTATGAATTTGGGAAGTTGATTTGGACCAACGGAAAGCATCTTGTTGGGAGTCCTATTTCAATAAAGTACCCTCATTAG 2058 0.395 MASSICHMLISLLLFVFLQHTFAIKQSYIVYLGSHSFGPNPSLLDSEIVTNSHYDLLGSFLGSTEKAKEAMIYSYNKYINGFAAMLDEDEAKEIAKHPNVVSLFLNKRYELHTTRSWEFLGLERGGVYPTDSVWKKTLGEDIIIGNLDTGVWPESKSFSDEGYGPIPKKWKGICQVAKGNPDKFYCNRKLIGARYFAKGYISKGKPNVTMDSARDTEGHGTHTLSTAGGNFVAGANVFGFGNGTASGGSPKARVAAYKVCWDGCFDVDILAGFEAAIADGVDVLSVSLGGDFPSEFFESGISIGSFHAIANNIVVLVSGGNSGPQPSSVANLEPWTFTVAASTVDRDFTSYVILGNKKIYKGASLSEVDLSRKLYPLISGVDAKLDNVSPDSASVCKEGSLDPKKVKGKILVCLRGDTARVDKGVQASRVGAVGMILVNDEDSGNGVIADPHVLPATNVGFADGSAIFSYINRTKSPVAYITNVKTQLGVKNTPTIASFSSRATTKTNNGVQILDSSLEKATPFAYGAGHVRPNLAVDPGLVYDLNVTDYLNYLCGREYTSDQLKVFYGKPYTCPKSFSLKDFNYPSITVYDFNKIWKTFSVTRTVTNVGPPSEYRAKIEAPPQFQVAVEPEILRFKHKGEKKEFKVTFTLKAGSKYVSDYEFGKLIWTNGKHLVGSPISIKYPH* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1534 685 Pfam PA domain 396 467 IPR003137 -
Psa4g1534 685 Pfam Subtilase family 139 506 IPR000209 GO:0006508|GO:0008236
Psa4g1534 685 ProSiteProfiles Serine proteases, subtilase domain profile. 116 685 - -
Psa4g1534 685 Pfam Fibronectin type-III domain 582 681 IPR041469 -
Psa4g1534 685 Gene3D Peptidase S8/S53 domain 141 510 IPR036852 GO:0004252|GO:0006508
Psa4g1534 685 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 503 IPR045051 -
Psa4g1534 685 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 503 680 IPR045051 -
Psa4g1534 685 CDD PA_subtilisin_like 351 481 - -
Psa4g1534 685 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Psa4g1534 685 SUPERFAMILY PA domain 403 476 IPR046450 -
Psa4g1534 685 CDD Peptidases_S8_3 109 380 IPR034197 -
Psa4g1534 685 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Psa4g1534 685 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 503 680 - -
Psa4g1534 685 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 23 503 - -
Psa4g1534 685 Gene3D - 554 683 - -
Psa4g1534 685 Gene3D - 345 488 - -
Psa4g1534 685 SUPERFAMILY Subtilisin-like 5 584 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1534 Psa-Chr4 106680538 106683972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1534 505 682 Subtilisin-like Serine Gene Family AT5G59810 44.134 2.97e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1534 - - pmum:103329153 693.345