Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1533 ATGAGAAAAACAACAATGTTTTCATCCATTGGTCATACCTTAATGTTACTTCTCCTTTGCCTTTTTCTCCATAAACCCACCCAAGCTATCAAAAAATCCTATGTTGTATACTTAGGACAACAATCTTATGGTTCAAGACTTTCAGCTCTTGATGTTGAATCTGTCACAAACTCTCATTATGCTATGCTTGGATCATATATTGGAAGCGCGGAGAAGGCGAAAGAAGCAATATTTTACTCTTATAGTAAATATTTTAATGGCTTTGCGGCATTGCTTGATGAAGATGAAGTTGCAAAGATTTCAAAGAATCCAAATGTGTTATCAATTTTCTTAAACAAACCACGAGAGCTTCACACAACTCATTCATGGGATTTTCTTGGATTTGAAAGAAATGGTGTTATTTCAAATCGTTCAATATGGAGCAAATCCAAAGGAGAAGATATAATTATTGGAAATTTAGACACCGGTGTTTGGCCTGAATCAATGAGCTTTAATGACGAAGGAGTTGGTCCAGTTCCAACCCGATGGCATGGAATTTGTCAAGTTGACAAAAATAATACCGATAATTTTCACTGCAACAGAAAGCTTATTGGAGCAAGATATTTTTACAAAGGCTATTTGGCAGATCTCGGTGATGCTAAAAATGTAACATTTAATAGCGCACGCGACCTCGATGGTCATGGCACACATACTTTATCAACCGCTGGAGGCAATTTCGTAGCGAATGCAAATATATTTGGATATGGAAATGGAACAGCAAGTGGCGGATCACCACAAGCGCGAGTTGCAGCCTATAAGGTGTGTTGGCCGCCACTTGCTATTGGTGGCGGATGTTACGAAGCAGACATTTTGGCTGCTTTTGAAGCCGCCATAAGTGACGGTGTTGATGTGATTTCCGCGTCTTTGGGTGGTAGTCCAGTTGAGTTTTTTGAAAGCAGTACTTCCATAGGATCTTTCCATGCTGTTGCTCAGGGCATTGTTGTAGTAAGTTCTGCAGGAAACACAGGGCCTTCTCCTCACACAGTATCTAACTTGGAACCATGGTCTATCACAGTTGGTGCAAGCACAATGGATCGATCTTTTACTAGTTTTGTTACACTTGGTAACAAGAAAATACTCGAGGGAGCTAGCCTTTCAGAGTCCAACTTGCCACCTAATAAGCTTTACCCTTTATTAAGCGCAGCCGATGCCGGAGCTCATAACGCATCTTCAGCTAACGCCTTGCTTTGCAAGAATGGAACTCTTGATCCGACAAAGGTTAAAGGAAAAATATTGGTTTGTCTACGCGGTGACAATGATAGAGCGGACAAGGGTGTCCAAGCTGCTCGTGCTGGCGCTGTTGGTATGGTTTTGGCTAATAACAAAGAAGGAGAAAATGACATTATAGCTGATGCTCATGTGCTTCCCGCTTCGCATATTACCTTTAAAGATGGAATCTACCTTTTTAATTACATCAACTCCACCAAGTCTCCTATGGCTTCAATCTCTAGAGTGGAAACACAGATGGGTGTAAAGCCAGCTCCATTTATGGCTTCCTTTTCATCAAGAGGGCCTAATTCTCTTGATCCATCAATCCTCAAGCCCGACATTACGGCCCCGGGAGTTGACATAATTGCTGCTTTTAGTGAAGCTGCATCTCCTTCTGATCAAGCATCGGATAAACGCAGATCTTCTTACAGTACTTTGTCAGGAACTTCAATGTCATGTCCTCATGTTTCCGGCATTGTTGGTTTAGTTAAATCTATTCATCCTGATTGGAGTCCAGCTGCTATTAAGTCCGCGATTATGACCACGGCGAGAATAAAAGATAATACTGGTCAGCTTATAACGGACTCGTCGCGGCAAAAGGCAACTCCTTTTGCATTTGGCGCAGGGCATGTCCAACCTAACCGCGCCGTGGACCCTGGACTTGTTTATGACCAAAATATTACCGACTACATGAACTATTTGTGCAATCGTGGCTACAAAGACTCTCATCTTAGTGTGTTCTACCGCAAGCCATACGCTTGTCCGAAATATTTCAGTTTAGTAGATTTCAATTATCCAACAATCACAATTCCTAACTTAAAGATTGGACATTCTCTAAATGTGACTCGTACACTTACCAATGTTGGAACCCCAAGCATATATGTGGTTCGTGTCGCAGCGCCTCAGGAGGTTTTAGTCTCTGTTGAGCCTAAGGAACTAAAGTTTAAGGAAAAGGGTGAAAAGAGAGAGTTTAGAGTGACTTTGAGTTTGAGGTCTCTAACTAAGAATAAGAATAGTAGTAGTATTGATTATGTATTTGGGAGGTTGGATTGGACTGATGGAAAGCATCATGTTAGGAGTTATATTGCAATTAGGCCACAAAACTGA 2355 0.414 MRKTTMFSSIGHTLMLLLLCLFLHKPTQAIKKSYVVYLGQQSYGSRLSALDVESVTNSHYAMLGSYIGSAEKAKEAIFYSYSKYFNGFAALLDEDEVAKISKNPNVLSIFLNKPRELHTTHSWDFLGFERNGVISNRSIWSKSKGEDIIIGNLDTGVWPESMSFNDEGVGPVPTRWHGICQVDKNNTDNFHCNRKLIGARYFYKGYLADLGDAKNVTFNSARDLDGHGTHTLSTAGGNFVANANIFGYGNGTASGGSPQARVAAYKVCWPPLAIGGGCYEADILAAFEAAISDGVDVISASLGGSPVEFFESSTSIGSFHAVAQGIVVVSSAGNTGPSPHTVSNLEPWSITVGASTMDRSFTSFVTLGNKKILEGASLSESNLPPNKLYPLLSAADAGAHNASSANALLCKNGTLDPTKVKGKILVCLRGDNDRADKGVQAARAGAVGMVLANNKEGENDIIADAHVLPASHITFKDGIYLFNYINSTKSPMASISRVETQMGVKPAPFMASFSSRGPNSLDPSILKPDITAPGVDIIAAFSEAASPSDQASDKRRSSYSTLSGTSMSCPHVSGIVGLVKSIHPDWSPAAIKSAIMTTARIKDNTGQLITDSSRQKATPFAFGAGHVQPNRAVDPGLVYDQNITDYMNYLCNRGYKDSHLSVFYRKPYACPKYFSLVDFNYPTITIPNLKIGHSLNVTRTLTNVGTPSIYVVRVAAPQEVLVSVEPKELKFKEKGEKREFRVTLSLRSLTKNKNSSSIDYVFGRLDWTDGKHHVRSYIAIRPQN* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1533 784 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Psa4g1533 784 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Psa4g1533 784 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Psa4g1533 784 Pfam Peptidase inhibitor I9 33 118 IPR010259 -
Psa4g1533 784 Gene3D - 358 502 - -
Psa4g1533 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 118 IPR037045 -
Psa4g1533 784 Pfam Subtilase family 145 625 IPR000209 GO:0006508|GO:0008236
Psa4g1533 784 ProSiteProfiles Serine proteases, subtilase domain profile. 122 633 - -
Psa4g1533 784 PANTHER PEPTIDASE S8 21 781 - -
Psa4g1533 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Psa4g1533 784 SUPERFAMILY Subtilisin-like 117 637 IPR036852 GO:0004252|GO:0006508
Psa4g1533 784 Gene3D Peptidase S8/S53 domain 147 646 IPR036852 GO:0004252|GO:0006508
Psa4g1533 784 Pfam Fibronectin type-III domain 678 780 IPR041469 -
Psa4g1533 784 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 21 781 - -
Psa4g1533 784 SUPERFAMILY PA domain 401 490 IPR046450 -
Psa4g1533 784 Pfam PA domain 406 478 IPR003137 -
Psa4g1533 784 CDD PA_subtilisin_like 365 495 - -
Psa4g1533 784 Gene3D - 650 782 - -
Psa4g1533 784 CDD Peptidases_S8_3 116 599 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1533 Psa-Chr4 106621552 106633259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1533 19 781 Subtilisin-like Serine Gene Family AT5G59810 57.386 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1533 - - cam:101513266 1054.66