Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1525 ATGATTGAGGATCACATATTTAAAGAATATGAAGAGCCTCCCGTCTTTGGAAAAAAGAGTATATTTGTGGTACGATCTAATGGGATAAATGAGCAGTGGGCACAATGTGATAGTTGCTTAAAATGGAGGAAGTTACTAGTTGATGTACTTATTCCCCCTAAGTGGACTTGTATGGAGAATTTTTGGGATCAAAGCAGGTGTTCATGCGCTGCTCCCAATGAATTGAACCCAAGGGAACTGGATAATCTTTTGAGAATGAACAAGGAATTCAAGAAACAAAGACTTGCAGCGGCAAGCCAGAGGCCAGCTCTGGAACGTGAAGGTCTTGATGCTTTGGCCAATGCTGCAGTACTTGGAGTTGATACAAGTGACTCTGGCAGGACACCAGTCGTGACCACTACAAAACACCCTCGTCATAGACTTGGGTGCTCCTGTATTGTCTGTATCCAGCCACCAAGTGGGAAGGGCAAACACAAACCTTCATGCACCTGTAACGTGTGCTTGACAGTTAAACGTCGGTTTAAAACCCTGCTATGA 537 0.4413 MIEDHIFKEYEEPPVFGKKSIFVVRSNGINEQWAQCDSCLKWRKLLVDVLIPPKWTCMENFWDQSRCSCAAPNELNPRELDNLLRMNKEFKKQRLAAASQRPALEREGLDALANAAVLGVDTSDSGRTPVVTTTKHPRHRLGCSCIVCIQPPSGKGKHKPSCTCNVCLTVKRRFKTLL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1525 178 Gene3D - 30 86 - -
Psa4g1525 178 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 178 - -
Psa4g1525 178 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 1 178 - -
Psa4g1525 178 ProSiteProfiles Zinc finger CW-type profile. 27 77 IPR011124 GO:0008270
Psa4g1525 178 Pfam CW-type Zinc Finger 32 74 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1525 Psa-Chr4 106251926 106252923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1525 2 178 B3 DNA Binding Superfamily AT4G32010 56.983 2.24e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1525 - - gmx:100778833 333.183