Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1473 ATGGTGATGAAAGCAGGACCTGAGAAACGACTTGTGTTGCTTTTGAATAAAATTGATCTTGTTCCTCGAGAATCTGTCGAGAAGTGGCTTAAGTACCTTCGAGAAGAATTACCTACTGTCGCTTTCAAGTGCAGTACACAACAGCAACGATCAAACCTAGGGTGTAAATCTTCTAAAAAAGTCAAACCAAGTAATACTTTGCAATTGAGTGATTGTCTCGGAGCGGAGACACTTCTCAAACTATTGAAGAATTATTCAAGAAGTACGAGATCAAGAAGTCAATCACTTTTGGTTTGGTTGGACTTCCCAATGTCAATGCAAGAGGTTCATTTGGACAAAAATGTTAAGCTGCTGGATTGCCCTGGTGTTGTTATGCTGAAGTCTCAAGGAAATAATGCTACTATTGCATTAAAAAATTGTAAGAGAATCAAAAAGTTAGAGGATCCAATTGGCCCAGTGAAAGAAATTCTCAAGCTCTGTCCTGCCAGGGTGCTGGTAGCTCTTTACAAGATTCCAAGGGCAAAAGCTCAAGAGGGTGGAATAGTTGACATTGAATCTGGCTGCAAGAACGTACTTCATGATTGGAATGAAGGTAAAATACCATATTATACTATGCCCCTAGTTAGTGAAGCAGAACCTTCAGAGGCCAAGATAGTTCCAGAGTTTTCTAAAGATTTTAACATTGATGAAGTCTACAACGGTGAAACTTCTTTTATTGGTACCCTTAAATCGACTATTGACTTAGATCCTGTTGAAGTTCCTTCAAGTTGCCCTCTTAACTTTGATGAGACAATGTTAGAGGATAACGAACATGTTACTTTGCCAAAACAAGATGAAGCTCCTGATAAAGTGGCTGACAATGATGAGGATGAATCCATGGAATATGATAAAGATGATGTTAGCAAGGACAAGGGTAAAACAGCAAGTAGTAAACAAAATGAGAAGTTATACACAGTAGATGGTATACTTAATCCAAAATTGAAGCGGGCAGAGAAGAAGAAAAAGAAGAAGGCTAACAAAGCTGGTTCATCTGATCCCATGGATGGTCATTATGACTTCAAAGTTGATTACTTCAAAAAAGACAAAATGGATGTTGAAGGTGGCAGCGGTGATGACGGCAATGATCGTCATGATGAACAAGTTAACTCTGAGGTTCCCATGTCTGGCGTTGAGCTATTGTATATACAATTTTGGCAAGACAAGAACTATGATTTTCATTACAAAGAGGATTTGTTTTCATATATTTTTTCCAGTTTTGATATCCGTTGCGTGAAAATTCTTAAACNTGATAAAGATGATGTTAGCAAGGACAAGGGTAAAACAGCAAGTAGTAAACAAAATGAGAAGTTATACACAGTAGATGGTATACTTAATCCAAAATTGAAGCGGGCAGAGAAGAAGAAAAAGAAGAAGGCTAACAAAGCTGGTTCATCTGATCCCATGGATGGTCATTATGACTTCAAAGTTGATTACTTCAAAAAAGACAAAATGGATGTTGAAGGTGGCAGCGGTGATGACGGCAATGATCGTCATGATGAACAAGTTAACTCTGAGGTTCCCATGTCTGGCGTTGAGGTTACTGCTGCACTCCGTATTACTGATGGAGCACTTGTGGTTGTTGACTGTGTGGAAGGTGTATGTGTCCAAACTGAAACTGTGCTTCGACAAGCCCTTGGAGAAAGGATCAGGCCTGTTCTTACAGTTAATAAGATGGACAAATGCTTCCTTGAGCTTCAGGTTGATGGAGAGGAGGCGTACCAGACCTTTCAAAGAGTTATTGAAAATGCTAATGTGATTATGGCTACATATGAAGATCCACTTCTCGGTGATGTTCAGGTGTATCCGGAGAAAGGAACAATTGCTTTTTCTGCTGGTCTGCATGGTTGGGCTTTTACTCTGACAAACTTTGCAAAAATATATGCCTCAAAATTTGGTGTTGATGAGTCCAAGATGATGGAGAGGCTTTGGGGAGAAAATTTCTTTGACCCAGCCACAAAAAAATGGACCACCAAGAATACTAGTTCAGCTACTTGCAAACGTGGGTTTGTTCAGTTCTGTTATGAGCCTATTAAGCAGATCATTAACACTTGTATGAATGATCAGAAGGATAAGTTGTGGCCTATGCTTACAAAGCTAGGGGTCACCATGAAGTCTGATGAGAAGGACCTGATGGAAATGATGATCTTCCATCTTCCATCACCATCCATGACCCAGAGGTACCGTGTTGAGAATTTGTACGAGGGTCCCCTTGATGATCAATATGCAAATGCTATCCGAAACTGTGATCCTGATGGTCCTCTGATGCTTTATGTCTCAAAGATGATTCCAGCATCTGATAAAGGAAGGTTTTTTGCTTTTGGCCGTGTATTTGCCGGTAAGGTGTCAACAGGTTTGAAGGTCAGAATTATGGGACCAATGATGCTTTATGTCTCAAAGATGATTCCAGCATCTGATAAAGGAAGGTTTTTTGCTTTTGGCCGTGTATTTGCCGGTAAGGTGTCAACAGGTTTGAAGGTCAGAATTATGGGACCAAATTATGTCCCTAGGGAGAAGAAAGATCTATATGTGAAAAGTGTTCAAGGAACTGTCATTTGGATGGGAAAGAGACAGGAGACTGTTGAGGATGTGCCATGTGGTAACACTGTTGCTTTGGTTGGTTTGGATCAATTTATCACGAAGAATGCTACATTGACAAATGAGAAGGAAGTTGATGCCCACTCTATCCGAGCTATGAAGTTTTCTGTCTCTCCTGTTGTGCGTGTTGTTGTTCAGTGCAAGGTTGCTTCAAATCTTCCTAAGTTAGTTGAGGGTCTCAAACGTTTGGCTAAGTTAGATCCTATGGTTGTCTGTACTATGAAGAGTTTAGAGAACACATTATTGCTGGTGCAGGAGAGCTTCATCTAG 2904 0.4015 MVMKAGPEKRLVLLLNKIDLVPRESVEKWLKYLREELPTVAFKCSTQQQRSNLGCKSSKKVKPSNTLQLSDCLGAETLLKLLKNYSRSTRSRSQSLLVWLDFPMSMQEVHLDKNVKLLDCPGVVMLKSQGNNATIALKNCKRIKKLEDPIGPVKEILKLCPARVLVALYKIPRAKAQEGGIVDIESGCKNVLHDWNEGKIPYYTMPLVSEAEPSEAKIVPEFSKDFNIDEVYNGETSFIGTLKSTIDLDPVEVPSSCPLNFDETMLEDNEHVTLPKQDEAPDKVADNDEDESMEYDKDDVSKDKGKTASSKQNEKLYTVDGILNPKLKRAEKKKKKKANKAGSSDPMDGHYDFKVDYFKKDKMDVEGGSGDDGNDRHDEQVNSEVPMSGVELLYIQFWQDKNYDFHYKEDLFSYIFSSFDIRCVKILKXDKDDVSKDKGKTASSKQNEKLYTVDGILNPKLKRAEKKKKKKANKAGSSDPMDGHYDFKVDYFKKDKMDVEGGSGDDGNDRHDEQVNSEVPMSGVEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDKCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTIAFSAGLHGWAFTLTNFAKIYASKFGVDESKMMERLWGENFFDPATKKWTTKNTSSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLTKLGVTMKSDEKDLMEMMIFHLPSPSMTQRYRVENLYEGPLDDQYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGLKVRIMGPMMLYVSKMIPASDKGRFFAFGRVFAGKVSTGLKVRIMGPNYVPREKKDLYVKSVQGTVIWMGKRQETVEDVPCGNTVALVGLDQFITKNATLTNEKEVDAHSIRAMKFSVSPVVRVVVQCKVASNLPKLVEGLKRLAKLDPMVVCTMKSLENTLLLVQESFI* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1473 967 Pfam Elongation factor Tu GTP binding domain 525 733 IPR000795 GO:0003924|GO:0005525
Psa4g1473 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 525 732 IPR027417 -
Psa4g1473 967 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 523 806 - -
Psa4g1473 967 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 804 953 - -
Psa4g1473 967 Gene3D Elongation Factor G (Translational Gtpase), domain 3 916 963 - -
Psa4g1473 967 SUPERFAMILY Translation proteins 804 904 IPR009000 -
Psa4g1473 967 SUPERFAMILY Translation proteins 734 805 IPR009000 -
Psa4g1473 967 Gene3D - 1 126 IPR027417 -
Psa4g1473 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 182 IPR027417 -
Psa4g1473 967 Gene3D Translation factors 734 804 - -
Psa4g1473 967 Gene3D Translation factors 805 914 - -
Psa4g1473 967 CDD EF2_II 805 900 - -
Psa4g1473 967 Gene3D Yeast translation eEF2 (G' domain) 633 731 - -
Psa4g1473 967 MobiDBLite consensus disorder prediction 266 311 - -
Psa4g1473 967 Gene3D - 511 618 IPR027417 -
Psa4g1473 967 Pfam Elongation factor Tu domain 2 824 897 IPR004161 GO:0005525
Psa4g1473 967 PANTHER BNAC03G76150D PROTEIN 804 953 - -
Psa4g1473 967 PANTHER BNAC03G76150D PROTEIN 523 806 - -
Psa4g1473 967 MobiDBLite consensus disorder prediction 266 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1473 Psa-Chr4 103325344 103330401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1473 525 953 Eukaryotic Initiation Factors Gene Family AT1G56070 79.955 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1473 K03234 - qsu:112038254 699.123