Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1469 ATGCAACAAATCACACCAATTCACTTCCAAACCACTAGAGTCTTACCCGAATACGATATCTTTATTCATACATCCGATGGCACTCGCATTCCCGCACACACTTGCATTCTGGCATCCGTGTCGCCGGTTCTCGAGAACATTATAGATCAGCCGCGTCAACACCGAAGCTCCGAAAGAATAATCCAAATCCACGGCGTTCCTTCCACCGCCGCAACCGCTTTCGTCGGCTTCCTCTACTCCTCCAGATGTACTGAGGATGAGATGGACAAATACGGAATCCACCTACTAGCACTATCTCATGTCTACAACGTGCCGCAACTGAAGCAGATGTGCATCAAAGGCCTATCTCAACGGTTAACCGTAGAGAACGTAGTGGATGTACTCCAGCTCGCGAGGCTCTGCGACGCACCGGATCTGCGTCTCCGCTGTATGAAGGTTCTCACTAATCACTTCAACACCGTTCAAAAAACCGAAGGGTGGAAGTTTCTGATAAAACACGATCCGTGGCTTGAACTCGATATCCTTCAGTTTATGGACGAGAGCGAAACGAGGAAAGAGAAATTGAGGAGGCATAGGGAGGAGTTTGGGTTATATGCGGAACTGAGTGAGGCGATGGAGTGTTTGGAGCATATATGTACGGAGGGGTGTATTGATGTTGGGCCTTATCATGTGGAGGTTGACAGAGAGAAGAAACCGTGCAAGAGATTCTCGACGTGTCAGGGTCTTCAGCTTCTGATTCGTCATTTTGCTACGTGCAAAAGGAGGGTGAAAGGAGGGTGCTGGAGATGCAAGCGGATGTGGCAGCTGTTCAGATTGCACTCATATGTTTGTCAACAAAACGATTCCTGCAATGTTCCTCTTTGCAGGTCAGTTTTTTACGTTTTTCTATTAAATAATATAGTAAAATTAGAATTAATTTATCGTTTTAAGTTTTGA 936 0.4626 MQQITPIHFQTTRVLPEYDIFIHTSDGTRIPAHTCILASVSPVLENIIDQPRQHRSSERIIQIHGVPSTAATAFVGFLYSSRCTEDEMDKYGIHLLALSHVYNVPQLKQMCIKGLSQRLTVENVVDVLQLARLCDAPDLRLRCMKVLTNHFNTVQKTEGWKFLIKHDPWLELDILQFMDESETRKEKLRRHREEFGLYAELSEAMECLEHICTEGCIDVGPYHVEVDREKKPCKRFSTCQGLQLLIRHFATCKRRVKGGCWRCKRMWQLFRLHSYVCQQNDSCNVPLCRSVFYVFLLNNIVKLELIYRFKF* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1469 311 ProSiteProfiles BTB domain profile. 18 87 IPR000210 GO:0005515
Psa4g1469 311 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 5 291 IPR044513 -
Psa4g1469 311 SMART BTB_4 18 119 IPR000210 GO:0005515
Psa4g1469 311 Pfam TAZ zinc finger 202 288 IPR000197 -
Psa4g1469 311 Pfam BTB/POZ domain 19 118 IPR000210 GO:0005515
Psa4g1469 311 Gene3D TAZ domain 196 294 IPR035898 -
Psa4g1469 311 SUPERFAMILY TAZ domain 196 291 IPR035898 -
Psa4g1469 311 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 5 291 - -
Psa4g1469 311 SMART TAZ_2 198 289 IPR000197 -
Psa4g1469 311 Gene3D - 120 194 - -
Psa4g1469 311 Gene3D Potassium Channel Kv1.1; Chain A 16 119 IPR011333 -
Psa4g1469 311 SUPERFAMILY POZ domain 18 118 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1469 Psa-Chr4 103238457 103242087 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Psa4g1469 BTB 1.7e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1469 - - cam:101496955 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1469 4 103238457 103242087 Psa4g1469 4 103238457 103242087 ECH