Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1443 ATGGCTCTCAGAAAATTGTCACATGAACAAATTACAGAAGCTTTTTCTTCTCTCTTTTTTCCGTCTCTTTTTTTCCTTCTAAGTCTGTTGATTGTGTTTAAGTTTGCATTTAGAAAAACCAAATCCAAAACCAATCTAAATCAGCTTCCATCTCCACCAAAACTACCGTTCATTGGTAATCTTCATCAGCTAGGAACACTTCCACATCGTTCTCTACGAGACCTGTCACTCAAATATGGAAACATGATGTTGTTGCAGTTAGGACAAAAACAAACTCCAACTCTAGTGATTTCATCCGGAGAAGTAGCCATGGAAATCATGAAAAATCATGATATAGTGTTTTCAAACCGACCACAACTTACAGCTCCAAGAATCTTGTTGTATGGTTGTACGGAAGTTGGTTTTGCAAATTATGGAGAAAATTGGAGACAGAAAAGAAAAATATGTGTTCTAGAACTTTTGAGTGTGAAAAGTGTAAAATCATTTCATGCTATTAGAGAAGGAGAAGTTGAAGAAATGGTGAGTAAGCTACGTGAAGCTAGCTCGAATAATGCATGTGTGAATCTAAGTGAGATGTTTGTTTCGGTAACAAACAATATTGTTTGTAAAAGTGCTCTTGGAAGGAAGTGTGAAGGAGAAGTGAAAGAGTTAGCAAGAAAGGTTATGATTTATCTTACAACTTTTGTTGTTGGTGATTACTTCCCTTCTTTGGGTTGGATTGATGTTCTTAGTGGGAAAATTAAGGAATTTAAGGACACTTTTGGAGCACTTGATGATTTGTTTGATAAAGTGATTGAGGAGCGTTTGGCTTTGAAGAAGATTGAAAATGATCAATTCAAGAAGAAAGGGTTTGTGGATATTCTTCTTCAATTACAAGAGGATGACATGCTTGGCTTTGAACTCACCAATAATGATGTTAAAGGAATTTTAATGGACATGTTTGTTGGAGGAACTGACACAACATCAGCAACATTAGAATGGACAATTTCAGAGCTGGTGAGACATCCATCCACAATGAAGAAAGCACAAGAAGAAGTAAGAAGAGTTGTAAGCAATAAATCAAAAGTTGAAGAAAGTGACATAAATCAAATGCACTATTTAAAATGTGTAGTGAAAGAAATTCTAAGGTTACGTCCTGTCACTCCTCTAATGGCTCCTCGAGAAACAATATCAAATGTGAATCTAAAAGGGTATGATATTCCTGAAAAAACAATGGTGTATGTAAACACTTGGGCTATACAAAGAGACCCTAAAAATTGGGAAAATCCTGAAGAGTTTATTCCAGAGAGATTTGAACACAGCCAAGTTGATTTTAGAGGGCAAGATTTTCAGTTCATTCCTTTTGGGTTTGGGAGAAGGGGGTGTCCTGGAATGAATTTTGGAATCACTACTGTTGAATATATACTTGCTAACCTTCTTTATTGGTTTGACTGGGAAACAAATTCAGGTAAACAAGATATAGATATGAGTGAAGTATTTGGACTTGTTGTATCAATGAAAGAACCACTTCACCTTAAACCAAAAGCATTTTCATTTTAA 1539 0.3548 MALRKLSHEQITEAFSSLFFPSLFFLLSLLIVFKFAFRKTKSKTNLNQLPSPPKLPFIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKQTPTLVISSGEVAMEIMKNHDIVFSNRPQLTAPRILLYGCTEVGFANYGENWRQKRKICVLELLSVKSVKSFHAIREGEVEEMVSKLREASSNNACVNLSEMFVSVTNNIVCKSALGRKCEGEVKELARKVMIYLTTFVVGDYFPSLGWIDVLSGKIKEFKDTFGALDDLFDKVIEERLALKKIENDQFKKKGFVDILLQLQEDDMLGFELTNNDVKGILMDMFVGGTDTTSATLEWTISELVRHPSTMKKAQEEVRRVVSNKSKVEESDINQMHYLKCVVKEILRLRPVTPLMAPRETISNVNLKGYDIPEKTMVYVNTWAIQRDPKNWENPEEFIPERFEHSQVDFRGQDFQFIPFGFGRRGCPGMNFGITTVEYILANLLYWFDWETNSGKQDIDMSEVFGLVVSMKEPLHLKPKAFSF* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1443 512 Pfam Cytochrome P450 50 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 Coils Coil 339 359 - -
Psa4g1443 512 Gene3D Cytochrome P450 34 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 511 - -
Psa4g1443 512 SUPERFAMILY Cytochrome P450 50 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PANTHER CYTOCHROME P450 71B11-RELATED 13 511 - -
Psa4g1443 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Psa4g1443 512 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1443 512 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1443 Psa-Chr4 101240103 101243509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1443 38 504 Cytochrome P450 AT3G48270 45.127 5.46e-140 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1443 K20617 - gmx:100803922 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1443 4 101240103 101243509 Psa4g1443 4 101240103 101243509 ECH
Psa4g1443 4 101240103 101243509 Psa5g2734 5 207804815 207806627 PCT