Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1428 ATGCTAGTGATAATCTCTTCCACTTTTCTCTTTCTTTTTCTTGTAATCAAATTCTATTCATATTCAACAAAAACCAAAAACTCACCTCCAAGATTACCTTTGATAGGAAATCTTCATCAAATTGGTTCATTCCCTCACCGTTCATTTTACGCACTTGCCAAAAAATATGGTCCTTTCATGCAAATGTATTTTGGTAAAGTTCCCATTCTCGTTATCTCTTCCGCTGAAGCAGCACGTGAGATAACCAAAACTCATGATCATGTCTTTGCAAACAGACCCCCCAAGATCAATTACGACATTCTTTTATATAACTTCAGAGATGTTTCATCTGCTCCATATGGAGAGTATTGGCGACAGTTGAGAAGCATTTGTATGTTACATCTTCTCAGTGCCAAGAGGGTGAAATCTCTTCGCGCTGTGAGGGAGGAAGAACTTGTTTTAATGATGGATAAAATAAGAGACTACTCTTCGAAATCGTTACCTGTGAATTTAAGCGAGTTGATTGCGTCGAAAACTAATGATGTGGTTTGTAGGGCTACCTTGGGAAATAAGTATAGTGGTGAAAGTGGGACGGGATTTGCTAAGTTGATGATGGATTTTACTGAGTTGCTTGGTACTTTTATGGTTGGGGACTATGTTCCTAGCCTTGATTGGATGACACATCTTTCTGGATATTACTCAAGAGCAAAGAAAGTGGCTAAACAATTTGACGATCTTTTGGAGGGTGTAGTCGAGGAACGTTTCAATAATCCGAAAGGCGATAACGAAGAACAGACTGATTTGGTTGATGTTTTGCTTTGGATCCAAAGGACAGAATCGCTCGGCTTTCCTATCGACAGAACAACCATAAAAGCTTTGTTACTGGACATGTTTGTTGCGGGTACAGACACTATATCAACTTTGCTAGAGTGGGAAATGTCAGAACTCATGAAGAATCCACACATGATGAAGAGATTAAAAGAAGAAGCAAGGACAGTGGCGAACGGAAGAACATACATAACAGAAGACGATTTGAGTAACATGAAATACTTAAAGGCGCTTGTTAAAGAAGCACTGCGGATGTATCCACCGATTCCACTACTAGTCCCTCGAGAAAGCAGACAAGATGTGAAAGTAAACGGTTACAGCATAAAAGCTGGGACAAGAGTGTTTATCAATGCATGGGGAATTGCAAGAGATCCAAGATATTGGGATCAACCAGATGAGTTCAGGCCGGAGAGATTCTTGGATACTTCCGTGGATGTAAAAGGAATTGATTACCAGTTGATTCCGTTCGGATCGGGGAGAAGAGGTTGTCCGGGACTAGTGTATGCTATGGCTGCTAATGATCTTGTGTTGGCGAACCTTGTGCATCAGTTTAACTGGGAGTTGCCTGGTGGTGCTGGGGCGAAGGTGGATATGTCTGAAGCATTTGGTTTTACCGTGCACAGAAAGTTTCCTCTTATGGCACATGCAACAGTTTCTAATCAGAAGTGA 1476 0.4106 MLVIISSTFLFLFLVIKFYSYSTKTKNSPPRLPLIGNLHQIGSFPHRSFYALAKKYGPFMQMYFGKVPILVISSAEAAREITKTHDHVFANRPPKINYDILLYNFRDVSSAPYGEYWRQLRSICMLHLLSAKRVKSLRAVREEELVLMMDKIRDYSSKSLPVNLSELIASKTNDVVCRATLGNKYSGESGTGFAKLMMDFTELLGTFMVGDYVPSLDWMTHLSGYYSRAKKVAKQFDDLLEGVVEERFNNPKGDNEEQTDLVDVLLWIQRTESLGFPIDRTTIKALLLDMFVAGTDTISTLLEWEMSELMKNPHMMKRLKEEARTVANGRTYITEDDLSNMKYLKALVKEALRMYPPIPLLVPRESRQDVKVNGYSIKAGTRVFINAWGIARDPRYWDQPDEFRPERFLDTSVDVKGIDYQLIPFGSGRRGCPGLVYAMAANDLVLANLVHQFNWELPGGAGAKVDMSEAFGFTVHRKFPLMAHATVSNQK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1428 491 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS E-class P450 group I signature 77 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 Pfam Cytochrome P450 28 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 489 - -
Psa4g1428 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Psa4g1428 491 PANTHER CYTOCHROME P450 71B11-RELATED 7 489 - -
Psa4g1428 491 Gene3D Cytochrome P450 21 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 SUPERFAMILY Cytochrome P450 29 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1428 491 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1428 Psa-Chr4 100750650 100753126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1428 1 486 Cytochrome P450 AT3G48280 51.016 1.30e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1428 - - mtr:MTR_4g104540 684.1