Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1427 ATGATTACAATGTCTATAAATATTGCGCCTAACTCCATTGGAATTGGAAGCAAAAACAAAAGAGAACACAATACAATGCTTCTCCTAATCTCTTCCATAGCTCTCACTCTTTTTATGCTAATCAAATGGTATTCCAATTCTACAAAAATAAAAAACTCACCACCTTCTCCTCCAAGATTACCTATAATAGGAAATCTCCATCAACTTGGCTTATTCCCTCACCGCACGTTTCAATCTCTAGCTAGAAAATATGGTCCTTTAATTCAAATCCATCTTGGTAACATAAAAGTTCTTGTTATCTCATCAGCTGAAGAAGCACGTGGTATATTGAAAACCCATGATCATGTTTTTGCAAACAGACCCCAGAAGAAAAACTATAAGATACTTTTATATGATTGCAAAGATGTTTCCACAGCTGCATATGGAGAGTATTGGAGACAGATAAGGAGTATATCTGTTTTACATCTTCTTAGTGCTAAAAGGGTTCAATCTCTTCGTGCTGTCAGAGAGGAAGAAGTTGGTTTTATGGTGGAGAAAATAAAGCAGTGTTGTTCAGCTTCGGTGCCGGTGAATATAAGTGAATTAGTCTCCACAACTATAAATGATATAGTTTGTAGGGTTGCTTTGGGGAGAAAGTATAGCGGTGAAAGTGGGAAGGGGTTTAAGAAGTTGTTGATGGAGTTTACAGAGTTACTTGGTTCTTTTAATGTTGGTGACTATGTTCCTTGGCTTGACTGGTTGACACATGTTTCTGGGTTTTATGCAAGAGCAAGAAGAGTTGCGAAACAGTTTGATGATCTTTTGGAGGAAGTTCTTGAAGATCATATCAGTAAACAGAAAGGAAACAGTGATTTTTCAAGTGCTGAAGACCATGGTGACTTTGTTGATGTTTTGCTTTGGATTCAAAGAACTGAATCATTTGGTTTTCCTATTGACAGAATCGTCATAAAGGCTCAATTATTGGACATGTTTATTGCAGGAACAGACACAATATCCACTTTGCTAGAGTGGGAAATGACACAACTCATAAGACACCCAAACATCATGAAGAAATTGCAACAAGAAGCAAAAACCGTGGCAAATGGTAAAAAACACATAACAGAAGACGATTTAACCAACATGAAATACTTAAAGGCAGTGGTTAAAGAAACACTACGACTACACCCTCCGTTTCCATTACTCGTCCCACGAAAAAGCAAAGAAGCTGTCAAACTAAACGGTTACCACATTGAAGCTGGCACACATGTTATCATCAACAACTGGGCCATTTCAAGAGATCCTACAAACTGGGAGCAACCAGAAGAGTTCAAGCCGGACAGATTCTTGAATAGTACGGTAGATGTTAAAGGAAACGATTTTCAGTTGATGCCGTTTGGGTCTGGGAGAAGGGGTTGTCCTGGAATAACGTATGCTACTGCGGCAAATGAACTTGTGTTGGCAAATCTTGTTCATCAGTTTAACTGGGAAGTGCCTGGTGGTGTTGAAAAAATTGACATGTCTCAAACAAGAGGGTTTATTGCGCATAGAAGTGTTCCTCTCATGGCATTTGCAGTTCCTAAAGAGAAGTAA 1569 0.3856 MITMSINIAPNSIGIGSKNKREHNTMLLLISSIALTLFMLIKWYSNSTKIKNSPPSPPRLPIIGNLHQLGLFPHRTFQSLARKYGPLIQIHLGNIKVLVISSAEEARGILKTHDHVFANRPQKKNYKILLYDCKDVSTAAYGEYWRQIRSISVLHLLSAKRVQSLRAVREEEVGFMVEKIKQCCSASVPVNISELVSTTINDIVCRVALGRKYSGESGKGFKKLLMEFTELLGSFNVGDYVPWLDWLTHVSGFYARARRVAKQFDDLLEEVLEDHISKQKGNSDFSSAEDHGDFVDVLLWIQRTESFGFPIDRIVIKAQLLDMFIAGTDTISTLLEWEMTQLIRHPNIMKKLQQEAKTVANGKKHITEDDLTNMKYLKAVVKETLRLHPPFPLLVPRKSKEAVKLNGYHIEAGTHVIINNWAISRDPTNWEQPEEFKPDRFLNSTVDVKGNDFQLMPFGSGRRGCPGITYATAANELVLANLVHQFNWEVPGGVEKIDMSQTRGFIAHRSVPLMAFAVPKEK* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1427 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 30 520 - -
Psa4g1427 522 Gene3D Cytochrome P450 44 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PANTHER CYTOCHROME P450 71B11-RELATED 30 520 - -
Psa4g1427 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Psa4g1427 522 SUPERFAMILY Cytochrome P450 52 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 Pfam Cytochrome P450 54 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1427 522 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1427 Psa-Chr4 100438589 100440970 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1427 26 519 Cytochrome P450 AT3G48280 49.698 1.65e-180 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1427 - - mtr:MTR_4g104540 651.358