Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1425 ATGCTGCTACTCATAATAATCTCTTCTATCTTTCTCATCCTTTTTATGATAATCAAATGGTATTCCAATTCTACAAAAACCAAAAACTCACCTCCTTCTCCTCCAAAATTCCCTATAATAGGAAATTTACATCAACTTGGCCTATTCCCTCACCGCACACTTCAATCTCTGGCTAAACAATATGGCCCTTTCATGCAAATCCATCTTGGGAGTGTACCAGTTCTTGTAGTCTCATCACCTGAAGCAGCATGTGAGATTATGAAAACTCATGACCGCGTCTTTGCAAACAGACCCCAAACTAAACTTTATGACATACTTTTATATGATTGCAAAGATGTTTCCACAGCTGCATATGGAGAGTATTGGAGACAGATAAGGAGTATTTCTGTTTTACATCTTCTCAGTGCTAAAAGGGTTCAATCTCTTCGCGCTGTGAGAGAGGAAGAAGTTGGTTTTATGGTGGAGAAAATAAAGCAGTGCTGTTCTGGTTCGGTGCCGGTGAATATAAGTGAATTAGTCTCCACAACTATTAACGATATAGTTTGTAGGGTTGCTTTGGGGAGAAAGTATAGCGGTGAAAGTGGGAAGGGGTTTAAGAAGTTGTTGATGGAGTTTACAGAGTTACTAGGTACTATTATTGTTGGTGACTATGTTCCTTGGCTTGATTGGTTGACCCATGTTTCTGGATTTTATGCAAGAGCAAAAAGAGTGGCTAAAGAGTTTGATGATCTTTTGGAGGATGTTGTTGAAGATCATATCAGGAAGCAGAAAGAAGACAGTGATTTTTCAAGTGCTGAAGATCATCGTGACTTTGTTGATGTTTTGCTTTGGATTCAAAGGACAGAATCACTTGGCTTTCCAATTGACAGAACTGTCATAAAAGCTCTGTTGTTGGACATGTTTTCTGGTGGCACAGACACAATATCCACGTTGCTAGAGTGGACAATGACAGAACTCTTAAAACATCCAAATATCATGAAGAAATTACAAGAAGAAGCAAGGGCAGTCGCTAATGGAAGAACACACATAACAGAAGATGATTTGCGTAGCATGAAATACTTACCAGCAGTGATTAAAGAAACACTGCGAGTACATCCACCAATCCCATTACTAGTCCCTCGAGAAAACAGACAAGATATCAAAGTAACTGGTTACCACATCAAAGGTGGGACACGAGTAATCATAAATGCTTGGGCCATTGCAAGAGATCCAACATATTGGGATCAACCTGAAGATTTCAAGCCAGAGAGATTCCTGAGTAGTGAAATAGATGTGAAGGGAAATGATTTCCGATTGATTCCATTTGGAGCAGGGAGAAGGGGCTGTCCAGGGATAGTTTATGCTATGGCTGCCGGTGAAATTGTGTTGGCCAACCTTGTGCATAAATTTAATTGGGAATTACATGGTGATGCTGCAGGATTGGAAAACTTGGACATGTCTGAAACATTTGGTTTAACCATGCATAGAAAGACTCCTCTTCTAGCAACTGCAACCTATGAATGA 1503 0.3992 MLLLIIISSIFLILFMIIKWYSNSTKTKNSPPSPPKFPIIGNLHQLGLFPHRTLQSLAKQYGPFMQIHLGSVPVLVVSSPEAACEIMKTHDRVFANRPQTKLYDILLYDCKDVSTAAYGEYWRQIRSISVLHLLSAKRVQSLRAVREEEVGFMVEKIKQCCSGSVPVNISELVSTTINDIVCRVALGRKYSGESGKGFKKLLMEFTELLGTIIVGDYVPWLDWLTHVSGFYARAKRVAKEFDDLLEDVVEDHIRKQKEDSDFSSAEDHRDFVDVLLWIQRTESLGFPIDRTVIKALLLDMFSGGTDTISTLLEWTMTELLKHPNIMKKLQEEARAVANGRTHITEDDLRSMKYLPAVIKETLRVHPPIPLLVPRENRQDIKVTGYHIKGGTRVIINAWAIARDPTYWDQPEDFKPERFLSSEIDVKGNDFRLIPFGAGRRGCPGIVYAMAAGEIVLANLVHKFNWELHGDAAGLENLDMSETFGLTMHRKTPLLATATYE* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1425 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Psa4g1425 500 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 SUPERFAMILY Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 PANTHER CYTOCHROME P450 71B11-RELATED 6 499 - -
Psa4g1425 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 499 - -
Psa4g1425 500 Gene3D Cytochrome P450 21 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1425 500 Pfam Cytochrome P450 31 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1425 Psa-Chr4 100379059 100382540 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1425 1 498 Cytochrome P450 AT3G48280 49.098 2.39e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1425 - - mtr:MTR_4g104540 642.114