Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1412 ATGGAATCAAATCCCAAAAATACAACCAAAATCCTCTTTAGCTACGGCGGTAAAATCCTCCCCCGCCATACCGACGGCAAGCTCCGCTACTCCGGCGGCCACACCAGAGTCCTCGCGCTTTCTCTCCCTATTTCTTTCTCAGAGTTGATGGTGAAGTTTTTTGAATTATGCGGTTCATCAGTGACACTGAAGTGTCCTTTACCGAACGGAGATTTAGAGACATTGATTTCAGTCACCAGCGACGAAGATCTGGCAAATATAATCGATGAATACGATCGAGCTTCTTCGTCGTTACCTCATCCATTGAAGATCAGAGCTATTCTTTCACCTCCCAAATCTCTCAAGAAAGTATCTCCTCCACAATCTTCTTCGTCCAGCGCAACATACTCTCCCTCTGGTTCGCTTTACGCGTCTGCCGAATCACTACCGTATGCGGCTGTGAATCGGCTGAATTGCTCGCCGGTTTCTCTAGGGTTTCCGATTGGTATTCCAGATAGGGCGGTGAAAGGTGGATGTTACACGGGGAAATTACATGGAAGCCCTAGATTGCTTTATCGCTACAGTAATAATTATTGTCAATGA 582 0.4639 MESNPKNTTKILFSYGGKILPRHTDGKLRYSGGHTRVLALSLPISFSELMVKFFELCGSSVTLKCPLPNGDLETLISVTSDEDLANIIDEYDRASSSLPHPLKIRAILSPPKSLKKVSPPQSSSSSATYSPSGSLYASAESLPYAAVNRLNCSPVSLGFPIGIPDRAVKGGCYTGKLHGSPRLLYRYSNNYCQ* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1412 193 Gene3D - 27 108 - -
Psa4g1412 193 Pfam PB1 domain 25 96 IPR000270 GO:0005515
Psa4g1412 193 SMART PB1_new 23 109 IPR000270 GO:0005515
Psa4g1412 193 CDD PB1_UP2 14 108 - -
Psa4g1412 193 PANTHER PB1 DOMAIN PROTEIN 1 192 - -
Psa4g1412 193 SUPERFAMILY CAD & PB1 domains 25 117 - -
Psa4g1412 193 PANTHER OS05G0427100 PROTEIN-RELATED 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1412 Psa-Chr4 99637507 99649764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1412 7 90 MAP Kinase Kinase Kinase AT2G35050 51.190 8.93e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1412 - - mtr:MTR_4g105020 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1412 4 99637507 99649764 Psa4g1412 4 99637507 99649764 ECH
Psa4g1412 4 99637507 99649764 Psa5g2716 5 206451274 206454729 PCT