Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1410 ATGGATACCCCACCGTTCCACTTCCTCTACTTTCTCCTCCTTATCCCCTCCACTCTCGCCCTCGATTTCATCTTCAACTCCTTCAACACAACCACCAACCTCACTCTCATCAACGACGCTCGGGTCGAATCTCCCATCATCCGCATGACCAACGACACCAACAAATTCTCTCTCGGAAGAGTTTTCTACCACACTAAACTCCCCATGAAACCTTCTTCCAATTCCTCAAACATCACTTCCTTCTCCACTTCCTTCATCTTCTCCATCTTACCAGATGTCCCCAATAGCCCCGGCTTCGGTCTCGCTTTCGTCCTATGCAACACAACCTCCCCTCCCGCCGCATTATCTAGCCAATACTTCGGCTTATTCTCAAGCGCTAAAACCGCTACCGTTTTCCCTCTTCTCGTCGTCGAATTTGATACCGGGCAAAACCCTGAATTCAACGACGAAAACAACAACCACATCGGAATTGATCTCAATAACATCTTATCCAAAAAACAAACACCTGCCGGTTATTTCAATTCCACCGGAAGCTTCGTATCTGTTCAAATGAACAGCGGTGAAAACATCCGAGCTTGGATCGATTTCGACGGCAAGAATTTGGAGATAAACGTTACTGTTGCTCCCGTCGGTGTTTCACAACCTTCAAAACCAACGCTTTCGTATAGAGATCCTGAAATGGCTAATTATGTTTCTCCTGAAATGTTTGTTGGATTTTCAGCTTCCAAAACGAATTGGATTGAAGCACAGAGAGTTCTCGCATGGAGCTTCAGCGACTCAGGGACTTCGAGGGAGTTAAACACGGCGAATTTACCAGTGTTCAAGCGAAAATCGGCGTCTTCACTTTCTGGCAAAGCGATTGCAGGGATTGCAGTTGGTTGTTTTGTTTTTGCTTTGAGTTGTGCGAGTGTGTTTATATTATTATATCTTCGATGGCGAAAAAACAAAAGAAAAGAAGAAGAAGATGACGTTGAAGATTGGGAAATGGAGTATTGGCCGCATAGATTCTCTTACGATGAACTAAGCATAGCCACAAAGGGTTTTCAAACTGTTATAGGCTATGGAGGGTTTGGAAGTGTTTACAAAGGGACTCTCATGAACAAAACATTGGTTGCGGTTAAACGTGTAAAACATGATTCTAAACAAGGGTTAAAAGAATTCATGGCGGAAATTTCAAGTATGGGAAGGCTTCAGCATAAGAATTTAGTACAAATGCGTGGATGGTGTAGAAAGGGTAATGAACTCATGTTGGTTTATGATTACATGCCTAATGGAAGCTTAAACAAATGGGTTTTTGATAAATCCGCACAAATTCTGGGATGGGATCAGCGTCGTAGGATTCTTGTTGATGTTGCAGAGGGTCTTAACTATCTTCATCATGGTTGGGACCAAGTTGTTATCCATAGGGATGTTAAATCTGGTAACATTTTGTTGGATGCTGATATGAGGGGAAGATTGGGAGATTTTGGTTTGGCTAAGCTTTACCAACATGGACAAGTTCCAAATACTACACGTGTGGTGGGAACGTTGGGGTATTTGGCGCCGGAAGCTGCAACGGCTGCGGCCCCAACTTCTGCGAGTGATGTGTATAGTTTCGGGGTGGTGCTGTTGGAGGTGGCTTGTGGGAGGAGGCCGTTGGAGACGGATGTGGTGGTGGAGGAGATTGTGCTTGTTGATTGGGTGAGGGATTTGTATGCAGGAGGGCATGTGGTTGAAGCTGCTGATTCTAGGATTAAGGGTGAGTTTGATGTGGATGATATGGAGATGGTGTTGAAGCTTGGGTTGGCCTGTTGTCATCCTGAGCCGGATAGGAGACCTACCATGAAGGAAGTTGTTGCGTTTCTTCTTGGGGAGGATGCAACAGAGGCGCCGGGGAAAGTTTTGTCCGATTTGGCTCATGGTGATGACAATGGTGGTGGTGGCGGCGGGGGCAGGGAATCGAATGAAGAGGCCCCTTTGCATTCCTCTATTCCTATATGA 1980 0.4561 MDTPPFHFLYFLLLIPSTLALDFIFNSFNTTTNLTLINDARVESPIIRMTNDTNKFSLGRVFYHTKLPMKPSSNSSNITSFSTSFIFSILPDVPNSPGFGLAFVLCNTTSPPAALSSQYFGLFSSAKTATVFPLLVVEFDTGQNPEFNDENNNHIGIDLNNILSKKQTPAGYFNSTGSFVSVQMNSGENIRAWIDFDGKNLEINVTVAPVGVSQPSKPTLSYRDPEMANYVSPEMFVGFSASKTNWIEAQRVLAWSFSDSGTSRELNTANLPVFKRKSASSLSGKAIAGIAVGCFVFALSCASVFILLYLRWRKNKRKEEEDDVEDWEMEYWPHRFSYDELSIATKGFQTVIGYGGFGSVYKGTLMNKTLVAVKRVKHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWVFDKSAQILGWDQRRRILVDVAEGLNYLHHGWDQVVIHRDVKSGNILLDADMRGRLGDFGLAKLYQHGQVPNTTRVVGTLGYLAPEAATAAAPTSASDVYSFGVVLLEVACGRRPLETDVVVEEIVLVDWVRDLYAGGHVVEAADSRIKGEFDVDDMEMVLKLGLACCHPEPDRRPTMKEVVAFLLGEDATEAPGKVLSDLAHGDDNGGGGGGGRESNEEAPLHSSIPI* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1410 659 PANTHER - 9 648 - -
Psa4g1410 659 MobiDBLite consensus disorder prediction 625 659 - -
Psa4g1410 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 274 IPR013320 -
Psa4g1410 659 Pfam Legume lectin domain 21 271 IPR001220 GO:0030246
Psa4g1410 659 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Psa4g1410 659 Gene3D Phosphorylase Kinase; domain 1 317 421 - -
Psa4g1410 659 CDD lectin_legume_LecRK_Arcelin_ConA 21 261 IPR001220 GO:0030246
Psa4g1410 659 Gene3D - 19 281 - -
Psa4g1410 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Psa4g1410 659 SUPERFAMILY Protein kinase-like (PK-like) 328 618 IPR011009 -
Psa4g1410 659 ProSiteProfiles Protein kinase domain profile. 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1410 659 SMART serkin_6 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1410 659 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 9 648 - -
Psa4g1410 659 Gene3D Transferase(Phosphotransferase) domain 1 422 624 - -
Psa4g1410 659 Pfam Protein kinase domain 350 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1410 659 CDD STKc_IRAK 352 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1410 Psa-Chr4 99468857 99472696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1410 17 617 Receptor kinase-like Gene Family AT1G15530 63.666 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa4g1410 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1410 - - gmx:100780660 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1410 4 99468857 99472696 Psa4g1410 4 99468857 99472696 ECH