Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1408 ATGGAAAATAAAGATGGCACCCCAAAAGAAGCAAAAGATTACTATTCTAGATCAATATGGTGGTCAGAAACATCACAAGCATTTGAGGATTACAAAAATTACAACAGAAATGGAACATATAGCTTCCAAGAAATTATGACACCAGAAATCTCTGAAACATTTGGTGACCTCAAAAGCTTAACAAGTAACAGAAACATAGCTAATGAAATAGTATCATACACGGGTAGCGATGAAAACGGTGAATTTGTTGTTCCTTATTCTATACAAATATTGTCAACAGAGATTGTCGAAATAGTTGAGGATGGGAAGAGTATAACAATCAGCAAAGATAGAAGAGTTGATGATCTTTATGTTGCTGTTGGAGAAGATGACTTAGATGTTGTGAAATGGGCTCTTGATCATGCTGTTTCTCCTGGTGCAAGGATTTTTCTTGTTCACGTCTCTCCTCCAATCACATTGATTCCTACGCCAGTTGGGATGTTTGAAAGAAACCAACTGACTCCACAACAAGTAAGACGTTACCTGAATGAAGTAAACAACAAGAGGAAAGATCTTTTGCAGACGTATATCCAGCTTAGTAATGAAGCCAAGGTAACTGCAGAAACATTGATTCTTGAGAGCAAATACAAAGGAAAAGCCATTCTGGATCTCATCTCTATTCTTAACATAACCAACCTTGTATTAGGAATCAAAAAGCTACCCTGCAAACGGCGCAATGATAAGTTAAGTGAAGGAGAGTTTGTAAAGAAAAATGCACCAAAGACATGTGATGTTACGTTAATTTACAACAGCAACGTGTTTGTGTCCGACGCTTGTTTGGATGTTCATGGATCCGGCTGA 840 0.375 MENKDGTPKEAKDYYSRSIWWSETSQAFEDYKNYNRNGTYSFQEIMTPEISETFGDLKSLTSNRNIANEIVSYTGSDENGEFVVPYSIQILSTEIVEIVEDGKSITISKDRRVDDLYVAVGEDDLDVVKWALDHAVSPGARIFLVHVSPPITLIPTPVGMFERNQLTPQQVRRYLNEVNNKRKDLLQTYIQLSNEAKVTAETLILESKYKGKAILDLISILNITNLVLGIKKLPCKRRNDKLSEGEFVKKNAPKTCDVTLIYNSNVFVSDACLDVHGSG* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1408 279 Gene3D HUPs 117 239 IPR014729 -
Psa4g1408 279 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 78 270 - -
Psa4g1408 279 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 122 234 - -
Psa4g1408 279 Coils Coil 175 195 - -
Psa4g1408 279 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 78 270 - -
Psa4g1408 279 Pfam Universal stress protein family 122 232 IPR006016 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1408 114 269 U-box Gene Family AT3G61390 30.247 1.30e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1408 - - pvu:PHAVU_003G204300g 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1408 4 99290790 99292379 Psa4g1408 4 99290790 99292379 ECH