Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1396 ATGGGAATGGAAATAACAGATCAGGTGAGAAAAAGAGAAAGAATGGCTAAGCTAAGGGAAGAAATTGCAGTTCAGAAAGCTAAGGAACATAACTTAATAAAACCATTCACATTACAGATTGCTGATTTCGATCTGTCGAATCAAGCCCCTGATGCAGCAACGCGTCTTCATTCTACCTGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAATATGCAATGACCGGAAACCTCTCTTCAAAGAGTGATGTTTACAGTTTTGGAGTCATACTGTTGGAACTCTTAACCGGCGTAAACCTGTTGATCATACACTGCCCCGAGGACAGTAAGCCTTGTGACATGGATGGCTGCTGTTGCTGCACTCTGTGTTCAATATGA 378 0.4233 MGMEITDQVRKRERMAKLREEIAVQKAKEHNLIKPFTLQIADFDLSNQAPDAATRLHSTCVLGTFGYHAPEYAMTGNLSSKSDVYSFGVILLELLTGVNLLIIHCPEDSKPCDMDGCCCCTLCSI* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1396 125 Pfam Protein kinase domain 35 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1396 125 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1396 125 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 37 98 - -
Psa4g1396 125 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 37 98 - -
Psa4g1396 125 SUPERFAMILY Protein kinase-like (PK-like) 35 100 IPR011009 -
Psa4g1396 125 Gene3D Transferase(Phosphotransferase) domain 1 12 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1396 Psa-Chr4 98555112 98556634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1396 36 114 Receptor kinase-like Gene Family AT4G02010 55.696 8.18e-21 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Psa4g1396 Pkinase 8.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1396 K13436 - tcc:18603761 110.923