Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1376 ATGATTTGTGCTTTTCAGGTTTATATTGATACGGTCGGAGATCCAGGGAAATATGAGGCAAAAATGTCTAAAAATTTCCCATCTATCAAATTTGTGGTTGCTAAGAAAGCTGATAGTCTTTATCCTGTTGTCAGTGGTGCAAGTATAGCTGCAAAGGTTACGAGGGACCGAGCTGTAAGAGATTGGGTGCTCGATGAGACTGCTGATAATATACACAGGAACTTTGGTTCTGGATATCCTGCAGATCCCGCAACCAAGTCTTGGCTAGAAAATCACAAACATTCTATCTTCGGTTTTCCAACATTGGTTCGGTTTAGTTGGGGAACTTGCAGCACTTATTTTAAAAGTGGTGCTGAAGTTTTATGGTAA 369 0.4038 MICAFQVYIDTVGDPGKYEAKMSKNFPSIKFVVAKKADSLYPVVSGASIAAKVTRDRAVRDWVLDETADNIHRNFGSGYPADPATKSWLENHKHSIFGFPTLVRFSWGTCSTYFKSGAEVLW* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1376 122 Pfam Ribonuclease HII 6 110 IPR024567 GO:0004523
Psa4g1376 122 Gene3D Ribonuclease hii. Domain 2 70 119 IPR023160 GO:0004523
Psa4g1376 122 PANTHER RIBONUCLEASE H2 SUBUNIT A 5 122 IPR001352 GO:0003723|GO:0004523
Psa4g1376 122 SUPERFAMILY Ribonuclease H-like 5 115 IPR012337 -
Psa4g1376 122 Gene3D - 3 69 IPR036397 GO:0003676
Psa4g1376 122 PANTHER RIBONUCLEASE 5 122 - -
Psa4g1376 122 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 1 119 IPR024567 GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1376 Psa-Chr4 95419665 95421195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1376 6 122 Core DNA Replication Machinery Family AT2G25100 68.376 2.85e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1376 K10743 - qsu:112025377 210.69