Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1373 ATGGAAGTTCCTAAATCCCCTTCCAAAGATAAACGATTCGCCACCAAACATAAATTGTTGTTTAAAATCGGTGCAGTCATTTTCATCCTTATTCTCTTGTTTCTGGGTTTTTATCTCGAGTCTTATAGCTGGAAATCCAATGCGTCGTCGTATTACACTGTTGTTATAGACTGTGGAAGTACAGGGACACGGGTTAATGTATATGAATGGATGTTAGGGAGTGTCGTAGGTAATAGAAATTTGCCAATTTTGCTACATTCATTTCCTGATAGTAATGCAACAAATGGGAATAGTTCACTTTGGAAAACCTCTTGTCAATATCATTGTATGCAAACTGAACCCGGGTTAGATAAATTGGTTAATGATTCTTTAGGAGTGAAACAAGCTTTGGAGCCTTTGATTGCTTGGGCGGAAAGTTTAGTTCCCCGAGAAATGCACGGTGATACGCCTATTTTTGTTCTTGCTACTGCTGGACTGAGGAGGCTTCAGAGGGAGGATGCATTTCGGGTTTTGGAGGATGTCGAGGCTGTTGTGAAAGATCACTCGTTTATGTTTGACAAGAGCTGGATTAGGGTCTTGAGTGGGAGGGAGGAGGCTTATTATGGTTGGGTTGCTTTGAATTACAAAATGGGTAGCTTTGATGATGGGCCTTCTACTTTGGGACTTGTTGATTTGGGTGGCTCGTCGTTACAGATTGTAGTGGAGATTGATCGTGATACCGGGGATGATGTGAACGCGATGAGATCGGAGTTCGGATCAACTGAACATAGGATTGTGGCGTACTCGTTGCCTGCATTTGGGTTGAATGAAGCATTTGATAGGACCGTTGTTATGCTTAGAAATAATCAGAGTGTAGAAAGAACCAGAGGTATATCTGAACTCAGACATCCTTGTCTGATGTCTACTTTTGTACAAAACTATACCTGCTCTTATTGCTCGGGACTTGATGACACTGACCGAAAAAATCATAGCCAACCTCAGAAAACTGTAAGTCTTACTGGAGAACCTGATTGGGAACAATGCAGAGAAGTAGCTATTGCTGCTGCTATGAACTTGAGCGATTCCCAAGTGTCACATCAGGCAGTTGGTTCAAATTGCCAAGGAAGTTTGTTTTCTGGTATTGGCACTGGTGCACTTAATTTAACAGCTGTTGCTCACCCAATGAAGCGATTTCATGCTTTATCTGGTTTCTTTTTTGTCTACAATAAGCTAAATTTGAACCCAAGAGCCAATTTAACAATGATTTGGGAGTCAGGCAAGCAAATATGTACAAATTTATGGGCTGGCTTGAGCAGTATATCTGACAATCCAAATTATGCCGGACAATTTTGTTTCCGGGTGGCTTATATGGCGTCATTGATCGAGTATGGCCTATGCCTCGGTGATGTAGAAATGGAGTTTGGTCCAGGTGATGTTTCTTGGACATTAGGAGCCGCATTGGTTGAAGGGAAATTTCAATGGTTAAATATTGCAAGCAACAAATCCCAAACTATAATTTCGACTTTAAAGAATGTGAAGGTCATGTCTTCTTCAACTTGTCTTTTTGCTGTCCTTTTGTTGCTTTTATTGATTGTTTATTGTACTCAAATTAAGCTACCTATGCCAAGCAGAAGGGCTTCTGCTCCCGGCTCGTCTTTGCCATCCCATACTCATACAAGACATCGAGCTAACTAA 1674 0.4128 MEVPKSPSKDKRFATKHKLLFKIGAVIFILILLFLGFYLESYSWKSNASSYYTVVIDCGSTGTRVNVYEWMLGSVVGNRNLPILLHSFPDSNATNGNSSLWKTSCQYHCMQTEPGLDKLVNDSLGVKQALEPLIAWAESLVPREMHGDTPIFVLATAGLRRLQREDAFRVLEDVEAVVKDHSFMFDKSWIRVLSGREEAYYGWVALNYKMGSFDDGPSTLGLVDLGGSSLQIVVEIDRDTGDDVNAMRSEFGSTEHRIVAYSLPAFGLNEAFDRTVVMLRNNQSVERTRGISELRHPCLMSTFVQNYTCSYCSGLDDTDRKNHSQPQKTVSLTGEPDWEQCREVAIAAAMNLSDSQVSHQAVGSNCQGSLFSGIGTGALNLTAVAHPMKRFHALSGFFFVYNKLNLNPRANLTMIWESGKQICTNLWAGLSSISDNPNYAGQFCFRVAYMASLIEYGLCLGDVEMEFGPGDVSWTLGAALVEGKFQWLNIASNKSQTIISTLKNVKVMSSSTCLFAVLLLLLLIVYCTQIKLPMPSRRASAPGSSLPSHTHTRHRAN* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1373 557 ProSitePatterns Lysosome-associated membrane glycoproteins duplicated domain signature. 512 526 IPR018134 -
Psa4g1373 557 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 4 556 IPR000407 GO:0016787
Psa4g1373 557 Gene3D Exopolyphosphatase. Domain 2 195 467 - -
Psa4g1373 557 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 4 556 - -
Psa4g1373 557 Gene3D - 41 194 - -
Psa4g1373 557 Pfam GDA1/CD39 (nucleoside phosphatase) family 46 484 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1373 Psa-Chr4 95244787 95249292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1373 14 482 Nodulin-like Gene Family AT4G19180 36.590 1.17e-92 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1373 - - gmx:100775757 796.193