Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1370 ATGCCTGTAAATCTATGGACCCTTTTTTTCTTATCCATTTTTCTATTACTTCCACACCATTCTTTTCTATCTTTTGCAGTAAACCCACAAGGGGAAGCTCTTCTTTCATGGAAGAGAACTTTGAATGGATCCTTGGAAAATTTGAGTAACTGGGACCCAATTGAAGAGACACCATGTAGCTGGTTTGGAGTGAGTTGCAACTTGAAGACCCAGGTAGTAGAATTGGATTTGAGGGATGTGGATTTGCTTGGAGAACTCCCAACAAATTTTATCTCATTGTTCTCCTTGACCAGTCTTATCTTAACCGGAACGAATCTCACCGGTACAATTCCAAAAGAACTAGGTAATCTTGTTGAACTCAGCTATTTGGACTTGAGTGACAATGCATTGAGTGGCGAAATCCCGAGTGAAATTTGCTATTTGTCTAAACTCGAGGAACTGCATCTGAACTCAAACGAGCTTGAGGGGCCGATACCAATCGCAATTGGGAACCTCACAAAGTTGACAAAACTGATCTTATATGATAATCAGCTGAGTGGCGAAATTCCAAATACAGTTGGCAACATGAAGAGCCTTCAAGTGATAAGAGCTGGAGGAAACAAGAATCTAGAAGGACAATTACCACATGAAATTGGAAACTGTTCCAGTTTGATCATGTTGGGTTTAGCAGAAACAAGCATCTCAGGTTTCATGCCACCAACTCTAGGACTATTGAAGAAGCTTGAAACATTAGCCATTTACACTTCACTCCTCTCGGGTCAAATTCCCTCTGAAATTGGTGACTGCACAAACCTTCAAAACATTTACCTTTATGAAAACTCACTCACAGGATCCATTCCAACCAAATTGGGAAACCTTAAGAACCTCAGAAACCTGCTACTGTGGCAGAACAATTTAGTAGGCACCATTCCCCAAGAGATTGGAAACTGTTACCAATTATCAGTGATCGACGCGTCAGTGAATTCACTAACAGGAAGTATCCCTAAAAGCTTTGGAAATTTGACTTTGTTGGAAGAACTTCAATTGAGCGCGAATCAGATTTCTGGTGAGATACCCGGAGAATTAGGGAACTGTCAACAACTGACTCACGTGGAGCTTGATAACAACCTTATATCAGGTACAATACCTTCCGAATTAGGAAACCTTGGGAATCTAACGTTGTTGTTTCTGTGGCATAATAAGTTACAAGGTAATATACCTTGGTCTCTTTCCAATTGTCAAAACCTTGAAGCTATTGATCTGTCACAGAACGTGTTAACTGGTCCTATACCAGAAGGGATATTCCAGCTTCAGAATCTTAACAAGCTTTTGCTTCTATCTAATAATCTCTCTGGTAAAATTCCCTCTCAGGTTGGGAATTGTTCTTCACTTATTCGCTTTAGAGCCAACGACAACAACATTACTGGTACTATTCCTTCTGAGATTGGGAATCTTAAGAATTTGAATTTCCTTGACTTTGGGACTAATCGAATTTCCGGGGTTATCCCGGAGGAGATATCTGGCTGTGGGAATCTCACTTTCTTGGACTTGCATTCGAATTTCATTGCCGGAAGCTTGCCGGAAAGTTTGAGTCAGCTTGTTTCACTTCAATTTCTTGATGTCTCTGATAACATGCTTCAGGGCTCAATGAGCCCATCTCTCGGCTCGCTCGCCGCACTTACTAAGCTGGTTCTTCGGAATAATCAAATCTCCGGTTCGATTCCCAGCAAACTTGGTTCCTGTGTAAAGTTGCAGCTATTGGACCTAAGCAGCAATCAATTCTCCGGTAAAATCCCCGGTAGTATTGGTAACATTCCGGCTCTGGAAATAGCTCTGAATCTAAGCACAAATCATCTCATTGGCAACATTCCCCGTGAGTTTTCAGATTTAACAAAACTCGGAGTTCTTGATCTATCTCACAACATTCTCACCGGAAACCTGGATTATCTCGCCGGATTAGAAAATCTCGTGGTCCTCAATATCTCCTCTAATAAATTCTCCGGCCGCGTTCCGAACACGCCGTTCTTTGCAAAACTTCCTTTAAACGTTCTCTCCGAAAACCCGTCGCTGTGCTTCGCCGGCAACCGGTGCTACAACGAAAGCGACGGAAAATCAGGGAAGCGTGCCAGGGAAGCGCGCGTGGTGATGGTTATTCTCCTAAGCGTCGCGTGTGTTTTACTCATGGCGGCGCTGTATGTTGTCCTGGCAGCAAAACGACGCGGAGAGCAAGAAAACGACGTGGAGCTCAATGGAAAAGAATGTGACGCGGAAATGGTCCCACCTTGGGAGGTGACATTGTACCAGAAACTCGATCTGTCAATATCCGACGTGGCAAAAGGTCTCTCAGCCGGCAATATCATCGGCCACGGCCGATCCGGCGTCGTTTACAAGGTTACCATGCCAGCAACCGGATTAACCATCGCAGCTAAAAAGTTCCGGTTATCAGAGAAATTCGCAGCTTCGTCATTTTCATCGGAGATTGCCACGTTGGCAAGAATACGACACCGTAACATCGTGCGGTTATTAGGTTGGGGTGCTAACCGCAGAACAAAGTTACTGTTTTACGATTATTTACCGAACGGTAATTTGGATGCAATGTTACACGAGGGATGTACCGGATTAGCAGTGGAATGGGAGACAAGGCTCAATATAGCAATTGGCGTCGCTGAAGGATTGACTTATTTGCATCATGATTGCGTCCCTGCTATCTTGCACCGGGATGTTAAGGCGCAAAATATTTTGTTAGGAGATAGATATGAAGCTTGTTTGGCTGATTTTGGATTCGCTCGTTTCGTTGAAGAACATCACTCTTCATTTTCAGTTAATCCTCAGTTTGCTGGTTCTTACGGATACATTGCTCCTGAGTATGCTTGTATGATGAAGATAACAGAGAAGAGTGATGTATACAGCTTTGGTGTGGTCCTACTAGAGATAATAACAGGGAAAAGACCGGTTGATCCATCATTTCCAGATGGAATTCATGTTATTCAATGGGTGAGGGAGCATTTGAAGAGCAAGAAGGACCCGATCGAGATTCTTGATTCAAAGCTACAAGGTCATCCAGATACGCAAATACAAGAGATGTTACAAGCACTTGGTATCTCGTTGTTGTGTACAAGTAATCGCGCTGATGATCGACCTAACATGAAAGATGTCGCAGCATTATTGAGAGAAATTCGGCATGACACTACATCAGCTGCTGAGCCCCACAAGCCTAAAAGATCTGAAACATCGTCATATTCTTCGTCTTCGGTGACCCCAGCTCAGTTGTTGTTTCTACAATCAAACTCACATTCACATTCCTCGTCAATCGCTTATTCCTCTTCCTCGGCCGCAGCAGCCTACCATTCCCCAAGGAACCAGTCATGA 3348 0.4355 MPVNLWTLFFLSIFLLLPHHSFLSFAVNPQGEALLSWKRTLNGSLENLSNWDPIEETPCSWFGVSCNLKTQVVELDLRDVDLLGELPTNFISLFSLTSLILTGTNLTGTIPKELGNLVELSYLDLSDNALSGEIPSEICYLSKLEELHLNSNELEGPIPIAIGNLTKLTKLILYDNQLSGEIPNTVGNMKSLQVIRAGGNKNLEGQLPHEIGNCSSLIMLGLAETSISGFMPPTLGLLKKLETLAIYTSLLSGQIPSEIGDCTNLQNIYLYENSLTGSIPTKLGNLKNLRNLLLWQNNLVGTIPQEIGNCYQLSVIDASVNSLTGSIPKSFGNLTLLEELQLSANQISGEIPGELGNCQQLTHVELDNNLISGTIPSELGNLGNLTLLFLWHNKLQGNIPWSLSNCQNLEAIDLSQNVLTGPIPEGIFQLQNLNKLLLLSNNLSGKIPSQVGNCSSLIRFRANDNNITGTIPSEIGNLKNLNFLDFGTNRISGVIPEEISGCGNLTFLDLHSNFIAGSLPESLSQLVSLQFLDVSDNMLQGSMSPSLGSLAALTKLVLRNNQISGSIPSKLGSCVKLQLLDLSSNQFSGKIPGSIGNIPALEIALNLSTNHLIGNIPREFSDLTKLGVLDLSHNILTGNLDYLAGLENLVVLNISSNKFSGRVPNTPFFAKLPLNVLSENPSLCFAGNRCYNESDGKSGKRAREARVVMVILLSVACVLLMAALYVVLAAKRRGEQENDVELNGKECDAEMVPPWEVTLYQKLDLSISDVAKGLSAGNIIGHGRSGVVYKVTMPATGLTIAAKKFRLSEKFAASSFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLDAMLHEGCTGLAVEWETRLNIAIGVAEGLTYLHHDCVPAILHRDVKAQNILLGDRYEACLADFGFARFVEEHHSSFSVNPQFAGSYGYIAPEYACMMKITEKSDVYSFGVVLLEIITGKRPVDPSFPDGIHVIQWVREHLKSKKDPIEILDSKLQGHPDTQIQEMLQALGISLLCTSNRADDRPNMKDVAALLREIRHDTTSAAEPHKPKRSETSSYSSSSVTPAQLLFLQSNSHSHSSSIAYSSSSAAAAYHSPRNQS* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1370 1115 Gene3D Ribonuclease Inhibitor 431 692 IPR032675 -
Psa4g1370 1115 MobiDBLite consensus disorder prediction 1054 1068 - -
Psa4g1370 1115 Gene3D Ribonuclease Inhibitor 326 427 IPR032675 -
Psa4g1370 1115 SUPERFAMILY Protein kinase-like (PK-like) 760 1049 IPR011009 -
Psa4g1370 1115 SMART LRR_typ_2 478 502 IPR003591 -
Psa4g1370 1115 SMART LRR_typ_2 165 189 IPR003591 -
Psa4g1370 1115 SMART LRR_typ_2 286 310 IPR003591 -
Psa4g1370 1115 SMART LRR_typ_2 334 358 IPR003591 -
Psa4g1370 1115 SMART LRR_typ_2 117 141 IPR003591 -
Psa4g1370 1115 SMART LRR_typ_2 550 574 IPR003591 -
Psa4g1370 1115 SMART LRR_typ_2 503 526 IPR003591 -
Psa4g1370 1115 SMART LRR_typ_2 382 406 IPR003591 -
Psa4g1370 1115 ProSitePatterns Protein kinases ATP-binding region signature. 780 804 IPR017441 GO:0005524
Psa4g1370 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Psa4g1370 1115 SMART LRR_sd22_2 165 180 - -
Psa4g1370 1115 SMART LRR_sd22_2 117 143 - -
Psa4g1370 1115 SMART LRR_sd22_2 262 288 - -
Psa4g1370 1115 SMART LRR_sd22_2 623 648 - -
Psa4g1370 1115 SMART LRR_sd22_2 526 552 - -
Psa4g1370 1115 SMART LRR_sd22_2 382 411 - -
Psa4g1370 1115 SMART LRR_sd22_2 478 501 - -
Psa4g1370 1115 MobiDBLite consensus disorder prediction 1054 1075 - -
Psa4g1370 1115 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Psa4g1370 1115 Gene3D Ribonuclease Inhibitor 26 201 IPR032675 -
Psa4g1370 1115 SUPERFAMILY L domain-like 44 305 - -
Psa4g1370 1115 SUPERFAMILY L domain-like 255 542 - -
Psa4g1370 1115 Pfam Protein kinase domain 777 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1370 1115 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 1070 - -
Psa4g1370 1115 ProSiteProfiles Protein kinase domain profile. 774 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1370 1115 SMART serkin_6 774 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1370 1115 Gene3D Ribonuclease Inhibitor 217 325 IPR032675 -
Psa4g1370 1115 SUPERFAMILY RNI-like 477 665 - -
Psa4g1370 1115 Pfam Leucine Rich Repeat 576 597 IPR001611 GO:0005515
Psa4g1370 1115 PANTHER OS01G0170300 PROTEIN 7 1070 - -
Psa4g1370 1115 Gene3D Transferase(Phosphotransferase) domain 1 851 1076 - -
Psa4g1370 1115 MobiDBLite consensus disorder prediction 1096 1115 - -
Psa4g1370 1115 Gene3D Phosphorylase Kinase; domain 1 750 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1370 Psa-Chr4 95178424 95182294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1370 25 1104 Receptor kinase-like Gene Family AT5G56040 55.005 0.0 1132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa4g1370 Pkinase 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1370 - - gmx:100778064 1691.78