Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1365 ATGCAAAATTTCAACATTTTACGCGAAATCATCATAATATCCTCATTGTTGTCATGTATAACTTGCTTCAATGATGATACTTCGATACACGAAACTGGTCTCACGTGTGGTTCTTATCAATACCCTGCTGATGGTGGTGGCAACAAGTTAATGCAAAACTTGATGGTTGCATTGGACGCGGTATCTTTCCAGGTGAAACAACATGGATGGGGAGCACAAACATTAGTCGGAAATTGGAATCCGATGCACGCGTTAGGCCAATGTCGTCGCGATCTCAATCCAACGCAATGCTATACTTGTTTCACGCAAGCAAGACAGTTATTATCGAGGTGCGCGCCAAAGGTTTCAGGTAGAGTTTACCTCGACGGTTGTTTTCTTCGTTATGATAACTACACTTTCTTTGATGAGGGTGTGGACTTCACGCATGATACGAGAACGTGTTCGACGGAAAGAGGAGAGACGGTTAGTCCGATACATGTTGAGGCGGTGATTATGAATGTGAGTAAGGGTGCCGGGGAACATATATTTGCGGAGGACGAGGAGGGTGGTGTTTTTGGATTGGCGCAGTGTTGGGAGACAGTGGATAAATGGAGTTGCCAGAGGTGTTTAAGAGAAGCGGCGAAGAAAGTGCAGGAATGTGTTCCTAGTTCTGAGGGTAGAAGCTTGTTTACTGGTTGTTTTATCAGGTATTCGACGCGTAAATTCTATAACGACATCTTTGTGCGGAATGATACTTGGACTGGTATTCCTCCTCCTGTTCCTTCTCGAGTTGAAAGGAAAATTGGTGTATGGATAATCGCTGCATGTGTAATATCCGTAATTGTAGTCATCTTACTTATTGTCCCAGTTATACTTATGAGCAAGAAGAGTACAACACCACATGAAAAAGGGTACAACAGTTTTGGCGCGTCGCCTAGTTTTGCCATCGTAACTGGTTTCAATTTTAGGTACGACGTGCTTGAAAGGGCGACAAGTTATTTCGATCCTGCAAACAAATTAGGCCTAAGTGAAGGCGATGGTTCTGTGTTCAAAGGAACACTCCCCTCAGGAAGAATCGTTGCTGTCAAACGTTTGTTTTTCGATACAAGACAGTGGACAGACGTGTTGTTCAATGAGGTTAATTTGATAAATGGAATTCAACATAAGAATGTGGTGAAACTTTTGGGTTGCAGCATTGATGGCCTTGAAAGCCTCTTGGTTTACGAATTTCTTCCTGGTAAAAGCCTTGATCAAATCCTTTTCGATAAGGACTCAGAAAATGCTCTACCTTGGGAGAAACGGTTTCAAATCATATGCGGGATAGCCGAGGGCTTAGCATACCTTCATGAAGGATCTGGAACAAAGATCATTCACAGAGACATAAAATCTAGCAGCATTCTACTCGACGAGGCTCTAAATCCAAAAATTGTTGATTTTGGTTTTTCACTTGGTAGTGCTGAAAATAAATATCATCTTAACACTAGAATTGCATACGTGGCTCCAGAGTGTCTCAACAAAGGAGAATTAACAGAGAAGGCAGATGTTTATGCTTTTGGTGTGATGCTTACTGAAATTGTTTGTGGTAAAAAGAACTGTGTTTTCCCACAAGGCTCAAATTCAATACTCCACTGTGTGTGGAAGAATTACAAGGCAAACAACATTACGACATCGGTTGATCCTGCTCTACAAGGAAAAATTGTGGCAGAAGAGGCATCAAATGCTCTCCAAGTTTCACTTCTTTGTACACAATCTTCTCCTCCTCTTAGACCATCAATGTCAGAAGTAGTTCAAATGCTAACAAAAAAAGAGTACAATATTCCCATTCCAATACAACAACCATTCATCAATTATACTAGGCTTACTCTAGATAACCGAACCGCTTCTACCGTGAGCAATATGTCAAATGGACGCGCAAGTTCAAGATCATCTTTCCATAGCACCACTAGTTCGTTACACCAAGGTGAAGAAACAACACTTTTAGAGAGTTCATTTTCTTCTTCTGCTAAGTTCAATACTTCAAGGAGTCCTGATTCAGATATCCAAATGGAACCTATGAAAATTGTGGACTTTTTTGACAATGAAGGGGTTAAGGATGACCTTGAAGCGGTTAGTAGTGGAAACCAACATGATAGCAAAAAAGGCTATTTGATCAAAATTCCGGGATATCAAATTCATTCTACTAGTCAAGTTTCTGATGAACATATAGTATTGAGTGGTCGAAGTTCGTGTCATAGTTATACTGGTGCATCGGAGCTAGGCTTTTTGAATGTTGATGACTCTGTGATTTCTAATTCACAACCGCTTCCTGCAGAACCACTTTGTAGGAAGTTTTGGAACGCTGGAAATTACGGTGATGGCCTTGGTTCGAAAGTCAGCTCTCAATATGCAAATAACTATCTTCATGTCCACCCTTTGTTCCTCCACTCTAATGCAACCTCACACAGATGGGTATTTGGTGCCATAGCCGAGCTTCTAGATAATGCAGTTGATGAGATTCAAAATGGGGCTACTTCTGTTAAGGTGGATAATATTTTAAATCCTAAAGATGGAAGTCCAGCATTGTTGATTCAAGACAATGGTGGTGGAATGGATCCAGAAGCAATGCGATGTTGCATGAGTTTTGGATTTTCGGATAAGACGTCAAAATCTGCAATTGGACAATATGGAAATGGTTTCAAGACTGGTAGTATGAGACTGGGTGCAGATGCAATTGTCTTCAGCAGCCACATGAATGATGTGGTATGTACTAAAAGCATTGGACTTCTATCATATTCATTCTTGACGCGAGCACAGCTCGACAGAATTGTAGTGCCCATGGTAAGTTATAAGTGCGATACATCAACTGGATACCTGGAAAAACTAAATCACCCAGAGCATTTTAGGTCTAATATGTCTTTGCTGCTGGACTGGTCTCCATATCGATCAGAAGCAGAAATCTTGAAACAGTTTGACGACATTGAAAATCATGGTACTAAAGTTATTATCTTCAATTTATGGCTCAATGATGATGGGAAGTTGGAACTAGACTTTGATACCGATCCCGAGGATATCCGTATTGCTGGAGATATTAAGAAGATTGATACGTCTCTAGCCAGGAAGAGAGTAAATGAGCAACATCTTGCTAACAGGCTTCATTATTCTTTACGTGATTACTTGTCCATATTGTACTTGCGGGTGCCAGAAAGTTTTAGAATCATATTGAGAGGGCAAGCTGTGAAGCTTCGTAACATAGCAGATGATCTTAAAGATATTGAGTATATCGTGTATAGACCAAAAAGTGGTGGTTTAGAAGAGGCATTAGTTGTGACAACAATTGGATTTCTTAAGGAAGCTCCTGCAGTCGGCATCCATGGCTTCAATATATATCACAAAAATCGGCTGATACTGCCATTTTGGCCGGTTGTGAATGGCAATAGGGGTAGAGGAGTTGTAGGGATGTTGCAAGCAGATGAAGTTCAGCCAACTCATAATAAGCAAGATTTTGAGAGAACTTCTCTGTTTCAAAAGCTTGAAATACGCTTGAAGGATATGACATGGGAATACTGGGATTGTTATTGTCATAAAATTGGATGTCAGGGAAGGAAGCGTAAAGTTCCAGTTGGCCCACTTAATCCACCAAAGGAGAAACTTCTTGTTACAGAAAACCCAGTTGCATTGGACAACTGTTCTTCACATGTACCATTATCGAACACACAAGGCGGATCTGAACAAACATATCTTACTAAGAGAAAGACACTTGGATTTATAGATCAACATGAGGTGAAAAGGCAAGCAGTGGAAAAGATTGAAACAGGTCTTTGCTGCAATCAAAATGTTCAGACCATTGCTTCTCTTCCTGACCAGATGGTTGACCAAGAAACTGCGAACTTACTGGAATGGAACAAGAAACTCATTGCTGATTGTTTTGCATTTGAAAAGGCGGAGGAGGAACTTATTCTCAAGGTGACACAGCTTAGGAATAAAATTGAAGAAGCAAAGCTTGAGTATGATAGACTTTTGGCAGAAGCAGTAGAGTATTAG 3999 0.4069 MQNFNILREIIIISSLLSCITCFNDDTSIHETGLTCGSYQYPADGGGNKLMQNLMVALDAVSFQVKQHGWGAQTLVGNWNPMHALGQCRRDLNPTQCYTCFTQARQLLSRCAPKVSGRVYLDGCFLRYDNYTFFDEGVDFTHDTRTCSTERGETVSPIHVEAVIMNVSKGAGEHIFAEDEEGGVFGLAQCWETVDKWSCQRCLREAAKKVQECVPSSEGRSLFTGCFIRYSTRKFYNDIFVRNDTWTGIPPPVPSRVERKIGVWIIAACVISVIVVILLIVPVILMSKKSTTPHEKGYNSFGASPSFAIVTGFNFRYDVLERATSYFDPANKLGLSEGDGSVFKGTLPSGRIVAVKRLFFDTRQWTDVLFNEVNLINGIQHKNVVKLLGCSIDGLESLLVYEFLPGKSLDQILFDKDSENALPWEKRFQIICGIAEGLAYLHEGSGTKIIHRDIKSSSILLDEALNPKIVDFGFSLGSAENKYHLNTRIAYVAPECLNKGELTEKADVYAFGVMLTEIVCGKKNCVFPQGSNSILHCVWKNYKANNITTSVDPALQGKIVAEEASNALQVSLLCTQSSPPLRPSMSEVVQMLTKKEYNIPIPIQQPFINYTRLTLDNRTASTVSNMSNGRASSRSSFHSTTSSLHQGEETTLLESSFSSSAKFNTSRSPDSDIQMEPMKIVDFFDNEGVKDDLEAVSSGNQHDSKKGYLIKIPGYQIHSTSQVSDEHIVLSGRSSCHSYTGASELGFLNVDDSVISNSQPLPAEPLCRKFWNAGNYGDGLGSKVSSQYANNYLHVHPLFLHSNATSHRWVFGAIAELLDNAVDEIQNGATSVKVDNILNPKDGSPALLIQDNGGGMDPEAMRCCMSFGFSDKTSKSAIGQYGNGFKTGSMRLGADAIVFSSHMNDVVCTKSIGLLSYSFLTRAQLDRIVVPMVSYKCDTSTGYLEKLNHPEHFRSNMSLLLDWSPYRSEAEILKQFDDIENHGTKVIIFNLWLNDDGKLELDFDTDPEDIRIAGDIKKIDTSLARKRVNEQHLANRLHYSLRDYLSILYLRVPESFRIILRGQAVKLRNIADDLKDIEYIVYRPKSGGLEEALVVTTIGFLKEAPAVGIHGFNIYHKNRLILPFWPVVNGNRGRGVVGMLQADEVQPTHNKQDFERTSLFQKLEIRLKDMTWEYWDCYCHKIGCQGRKRKVPVGPLNPPKEKLLVTENPVALDNCSSHVPLSNTQGGSEQTYLTKRKTLGFIDQHEVKRQAVEKIETGLCCNQNVQTIASLPDQMVDQETANLLEWNKKLIADCFAFEKAEEELILKVTQLRNKIEEAKLEYDRLLAEAVEY* 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1365 1332 Gene3D - 798 998 IPR036890 -
Psa4g1365 1332 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Psa4g1365 1332 MobiDBLite consensus disorder prediction 624 649 - -
Psa4g1365 1332 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 676 - -
Psa4g1365 1332 Coils Coil 1301 1332 - -
Psa4g1365 1332 Gene3D Transferase(Phosphotransferase) domain 1 404 601 - -
Psa4g1365 1332 Pfam Morc6 ribosomal protein S5 domain 2-like 1039 1175 IPR041006 -
Psa4g1365 1332 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 811 909 - -
Psa4g1365 1332 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 676 - -
Psa4g1365 1332 Gene3D Phosphorylase Kinase; domain 1 309 403 - -
Psa4g1365 1332 Pfam Protein tyrosine and serine/threonine kinase 340 592 IPR001245 GO:0004672|GO:0006468
Psa4g1365 1332 SUPERFAMILY Protein kinase-like (PK-like) 310 597 IPR011009 -
Psa4g1365 1332 ProSiteProfiles Protein kinase domain profile. 327 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1365 1332 ProSiteProfiles Gnk2-homologous domain profile. 134 235 IPR002902 -
Psa4g1365 1332 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 808 1012 IPR036890 -
Psa4g1365 1332 Pfam Salt stress response/antifungal 50 131 IPR002902 -
Psa4g1365 1332 Pfam Salt stress response/antifungal 177 232 IPR002902 -
Psa4g1365 1332 Gene3D - 35 133 IPR038408 -
Psa4g1365 1332 Gene3D - 152 235 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1365 Psa-Chr4 94952977 94985885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1365 53 638 Receptor kinase-like Gene Family AT1G70520 38.651 2.80e-126 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g1365 PK_Tyr_Ser-Thr 5.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1365 - - mtr:MTR_4g105530 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1365 4 94952977 94985885 Psa4g1365 4 94952977 94985885 ECH