Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1334 ATGATCTTCCTTTCCTTCTTACAGCACTGTCTGAGAGCCATAGTGAAGAAAAGACAGAGTCATATTGAAATGGAACTGAAACGCTATTTGTTGGAATGTATTCCATTTGCAGCAATGGTGATTGTCGAGATTCTTGATGTTGGGATGACCACATTGTGTAAAGCAGCTATGTCCACAAGAGGAATGAATCACTTTGTGTTTGTTCTTTACTCCAATGCTCTTGCCACTTTCATCCTCATCCCTTCCTCTTTCCTCATCAACAGGACAACAAGACCACCACTGTCTTTCTCACTTCTAGCCAAATTCTTCCTCCTCGGCCTTGTCGGCATAACTATAATGCAGAATTGTGTATTCACTGGCATAAACTACAGCTCTCCCACCCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATCACTTTTGTTCTAGCAATCATCTTCAGGATGGAGAAGTTGGATGTTGGAAGCTCAATAAGCCAAGCCAAAATGGTGGGGACAGTACTGTCTATCTCAGGAGCATTGCTAGTCACCCTTTACAGAGGCGCTCCCATTCGCAGCTTTCAAACTCAACCCTCGACATCGCAACAATTTCAGTCTCTTTTTGAAGAAACCGGTAACTGGGTCATTGGAGGTCTCTTTCTATTCACTGCCTCTTTCTCTCTTTCCGTATGGAATATTGCTCAGGCAGCAATTCTTAGAGGATATCCATCTCAGTTGACCATAGTAGCATTCTATTGCCTGTTTGGAACAGTCCAATGTGCAGTACTTTCTCTAATTGCAGTCAAAGATCGAAATGCTTGGAATCCTAGTGCTGGCATTGAGCTTATCTCTATAATATATTCAGCTGTTTTTGGAAGTGTGGTAACATTTTCTGTACTGACTTGGTGCATAGATAGGAAAGGGCCTGTGTTTGTTTCCATGTTCAAACCAGTTGGAATTGCCATTGCTGCTTTTATGAGTGCTGCCTTCCTTGGTGAAACACTTCACGTTGGCAGTATCATGGGAGCAGTGGTAATCGCCATTGGATTTTACACAGTTATGTGGGCACAATCAAAAGAGGGAAATGTGAATGGCCTAGAAGTTAATGGATCATCATCATCCTCATCTGCCGAAGAAAGTCCTCTACTAGAGTCTCGGTGA 1140 0.4298 MIFLSFLQHCLRAIVKKRQSHIEMELKRYLLECIPFAAMVIVEILDVGMTTLCKAAMSTRGMNHFVFVLYSNALATFILIPSSFLINRTTRPPLSFSLLAKFFLLGLVGITIMQNCVFTGINYSSPTLGSAMSNLTPAITFVLAIIFRMEKLDVGSSISQAKMVGTVLSISGALLVTLYRGAPIRSFQTQPSTSQQFQSLFEETGNWVIGGLFLFTASFSLSVWNIAQAAILRGYPSQLTIVAFYCLFGTVQCAVLSLIAVKDRNAWNPSAGIELISIIYSAVFGSVVTFSVLTWCIDRKGPVFVSMFKPVGIAIAAFMSAAFLGETLHVGSIMGAVVIAIGFYTVMWAQSKEGNVNGLEVNGSSSSSSAEESPLLESR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1334 379 PANTHER WAT1-RELATED PROTEIN 31 372 - -
Psa4g1334 379 MobiDBLite consensus disorder prediction 360 379 - -
Psa4g1334 379 PANTHER WAT1-RELATED PROTEIN 31 372 IPR030184 GO:0016021|GO:0022857
Psa4g1334 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 269 352 - -
Psa4g1334 379 Pfam EamA-like transporter family 209 347 IPR000620 GO:0016020|GO:0016021
Psa4g1334 379 Pfam EamA-like transporter family 48 177 IPR000620 GO:0016020|GO:0016021
Psa4g1334 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 73 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1334 Psa-Chr4 93438229 93440435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1334 27 376 Nodulin-like Gene Family AT5G40240 45.070 4.72e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1334 - - ccaj:109809148 468.774