Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1323 ATGGCAGCTCGCTCACTTTCCCGCTTACTCTCTCGCTCTCTGTCCTCCTCTTCTTCCGGACCTGCTGCTTCTCTGCTTCGCTTACCACTAGCACTAGGAAGAAAATCTGAAGGGTGGAGCAACACAAACAGATTCAGCACCGCTGCAGCTGTTGAGGAATTGATTACTCCACAAGTTTCAATAAATCATACACAGCTTCTCATAAATGGCCAATTTGTAGATGCTGCATCAGGGAAAACATTTCCAACTTATGACCCGCGCACAGGAGAAGTGATTGCTCAGGTAGCTGAAGGCGATGCTGAAGATATCAATCGTGCAGTATCAGCAGCTCGTGAGGCCTTTGATAATGGACCTTGGCCTAAAATGACTGCTTATGAAAGAAGTCGTATATTGTTGCGCTTTGCTGATTTGGTGGAGAAGCATAATGATGAGATTGCAGCTCTGGAGACATGGAACAATGGAAAGCTTTATGATCAGGCTGCCAAGACTGAATTACCTATGTTTGTCCGCTTATTTCGCTATTATGCTGGGTGGGCAGATAAAATTCATGGGATGACAATTCCAGCTGATGGAAGTTATCATGTCCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAATTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCACTAGCATGTGGTAATACCATTGTCCTGAAGACTTCTGAGCAAACACCGCTAACGGCTCTCATCGTGGCAAAACTATTTCACGAGGCTGGTCTTCCCCCAGGTGTTCTGAATATAGTTTCTGGCTTTGGTCCAACTGCTGGTGCATCTCTTGCAAGTCATATGGATGTGGACAAGTTAGCATTCACTGGATCGACGGATACTGGAAAGACTGTACTTCAACTGGCTGCAAGAAGCAATCTTAAGCAAGTGACATTGGAACTTGGAGGAAAATCACCTTTCATTATTTGTGAGGATGCTGATGTTGACAAGGCTGTTGAAATTGCACACTTTGCTCTATTTTTTAATCAGGGGCAATGCTGTTGTGCTGGATCCCGTACCTTCGTACATGAGAGTATCTATGACGAGTTCTTGGAGAAAGCTAAGGAGCGGGCTTTGAGACGTGTTGTTGGTGATCCGTTTAAAAATGGTGTAGAACAAGGTCCTCAGATTGATTCGAAACAATTTGAGAAAGTACTTAGGTACATAAAGTCTGGAATTGATAGCAATGCTACTCTTGAATGTGGAGGTGGGAGATTGGGTTCAAAAGGCTTCTTTGTCCAACCAACAGTGTTCTCAAATGTTCAGGATGATATGTTGATAGCAAAAGATGAAATCTTTGGGCCAGTTCAGTCCATCTTGAAGTTCAGGGACATTGATGAAGTGATACGACGGGCAAATGCGACACAATATGGTTTAGCGGCAGGTGTTTTCACGAAAAATTTGAGCACAGCCAACACCTTGATGCGGGCACTGAGAGCTGGAACAGTGTGGATTAATTGCTTTGATGTTTTTGATGCTGCGATTCCTTTTGGTGGTTACAAGATGAGTGGGAATGGTAGGGAGAAAGGAATCTATAGTCTTAATAACTATCTGCAGGTAAAAGCTGTGGTGTCTCCCCTGAAGAATCCTGCGTGGTTGTAG 1635 0.4398 MAARSLSRLLSRSLSSSSSGPAASLLRLPLALGRKSEGWSNTNRFSTAAAVEELITPQVSINHTQLLINGQFVDAASGKTFPTYDPRTGEVIAQVAEGDAEDINRAVSAAREAFDNGPWPKMTAYERSRILLRFADLVEKHNDEIAALETWNNGKLYDQAAKTELPMFVRLFRYYAGWADKIHGMTIPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTSEQTPLTALIVAKLFHEAGLPPGVLNIVSGFGPTAGASLASHMDVDKLAFTGSTDTGKTVLQLAARSNLKQVTLELGGKSPFIICEDADVDKAVEIAHFALFFNQGQCCCAGSRTFVHESIYDEFLEKAKERALRRVVGDPFKNGVEQGPQIDSKQFEKVLRYIKSGIDSNATLECGGGRLGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQSILKFRDIDEVIRRANATQYGLAAGVFTKNLSTANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQVKAVVSPLKNPAWL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1323 544 SUPERFAMILY ALDH-like 58 537 IPR016161 GO:0016491
Psa4g1323 544 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 32 544 - -
Psa4g1323 544 CDD ALDH_F2BC 61 535 - -
Psa4g1323 544 Pfam Aldehyde dehydrogenase family 72 534 IPR015590 GO:0016491
Psa4g1323 544 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 338 349 IPR016160 GO:0016491
Psa4g1323 544 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 310 317 IPR029510 GO:0016491
Psa4g1323 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 316 505 IPR016163 GO:0016620
Psa4g1323 544 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 32 544 - -
Psa4g1323 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 534 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1323 Psa-Chr4 93152611 93157262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1323 1 544 Aldehyde Dehydrogenase Gene Family AT3G48000 78.532 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1323 K00128 - gmx:100811501 924.85