Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1314 ATGGGAAACGTGGGGAAGAGTTATTGTAGGTATCTCTTCCTATTTTTATTTCATTTTTCAAACAACTCTCTCTTTCCACTTTTCCCTATTCCTTCGTCCTCTCTTGTTCTTCCCTCACAATCCAGAAAAACCTCCTCCTCCGTTCTTCTGTCTCTCTCCGATCGGAATCTCCACTCCTCCTCTCTCTCGTTCAGAATCATAGAGCTTACATGTCCCTGCGGGAATGGATATCTAATCAGGAAGGTAACAACAAAAGGCCCTAACATGGATCGTCCATATTACAAATGCCCTGGTTTTGATAAGGGAGATGGTGATTATAGATTCTCTGAGATTTCCTTCGAGTTCCACTCCCCAGGCACAATCTCTGTCTCCTTCCAGCCGAAGTTCTCAGTCTCCTCCAGTAGCCAAGGAGCAAGGAGCAATGTGATGAGGAAGCATGAACTACTTGAACCTGAACCGAGCTTCAACTATGCCGGCGTGGCGACTGCGATTTCCGGCCACCGTGAAACCCCTGGCCAGGGAGTTATTGATGATGAGGTTGTTGGTTTTTCGAATCATGGAGGTGGAACCGGTATCAGTTCGTTCATGCAACAAGGGAGTAATAGTCAGTATAAAACTAATAGTTCGGAAAAAGCCGACCAATTGCTGAATTCTTTCAGTGTCTATAATGGACATGGGGGTTTTCAGGTTGCTAATTACTGCCGGGAACGTCTCCATTCAGCTGGTTGCCATTTTAAGTCAAACAATAGCGGAGGTAACGGCGGGGGATCTGAGTCTAACATTGAACCTATTGCTCCTGAGACTGCTGGGTCCACTGCAGTGGTTGCCATTTTAAGTCAAACACACATAATAATTGCAAAGTGCGGGGATTCACGAGCTGTCTTGTATCGCGGGAAAGAAGCCATGGCGTTGTCTGCTGATCACAAACAACAAGCCTGTTCAAGATTCTTCTGA 954 0.4602 MGNVGKSYCRYLFLFLFHFSNNSLFPLFPIPSSSLVLPSQSRKTSSSVLLSLSDRNLHSSSLSFRIIELTCPCGNGYLIRKVTTKGPNMDRPYYKCPGFDKGDGDYRFSEISFEFHSPGTISVSFQPKFSVSSSSQGARSNVMRKHELLEPEPSFNYAGVATAISGHRETPGQGVIDDEVVGFSNHGGGTGISSFMQQGSNSQYKTNSSEKADQLLNSFSVYNGHGGFQVANYCRERLHSAGCHFKSNNSGGNGGGSESNIEPIAPETAGSTAVVAILSQTHIIIAKCGDSRAVLYRGKEAMALSADHKQQACSRFF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1314 317 Gene3D - 183 312 IPR036457 -
Psa4g1314 317 ProSiteProfiles PPM-type phosphatase domain profile. 191 317 IPR001932 -
Psa4g1314 317 PANTHER ALPHABET, ISOFORM E-RELATED 210 241 - -
Psa4g1314 317 PANTHER ALPHABET, ISOFORM E-RELATED 249 310 - -
Psa4g1314 317 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 210 241 - -
Psa4g1314 317 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 249 310 - -
Psa4g1314 317 Pfam Protein phosphatase 2C 193 310 IPR001932 -
Psa4g1314 317 SUPERFAMILY PP2C-like 218 310 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1314 Psa-Chr4 92996009 92998554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1314 219 309 PP2C-type Phosphatase Gene Family AT4G26080 48.148 2.16e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1314 K14497 - gmx:100802159 122.094