Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1310 ATGAAGGAGAGTAGTGATGGATTTGTTAGAGCGGATCAGATTGATCTGAAAAGCATCGATGAACAGCTTGAGAGACACCTCAACAAAGTGTTGACTATTGACAAGAAAAAGCGCGTTGAAGAACAAGATTCTACCGCTTCTAATGTTTTTGATCATGCTCGAGTTCATACCAGTAGCGCTGGTAATTCTCCTGTTAAGTTCAAAACGAACTTCAAGAAGCAGAAGCAGGATTGGGAAATTGATCCTTCTAAGCTTATTATCAAGAGTGTTATTGCTCGTGGTACTTTTGGGACTGTTCATCGTGGTGTCTATGATACTCAAGATGTTGCTGTTAAATTGCTTGACTGGGGTGAAGAAGGCCAAAGGACAGAGGCTGAAGTTTCTTCACTGAGGGCAGCGTTTATACAGGAAGTTGCTGTTTGGCATAAACTTGATCATCCCAATGTCACAAAGTTTATAGGGGCAACAATGGGATCTGCAGAATTGCAGATACAAACTGATACAGGTCTAATTGGCATGCCAAGCAATGTCTGCTGTGTTGTCGTGGAGTATCTTGCTGGAGGTACTCTGAAATCATACCTGATAAAAAACAGGAGGAGGAAGTTAGCTTTTAAGGTTGTCATCCAGTTGGCGCTTGATTTAGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGATTGTCCACAGAGACGTGAAGACAGAGAACATGCTGCTGGATAAGACTCGCACAGTGAAAATTGCTGATTTTGGTGTTGCGCGAGTCGAGGCATCAAATCCTAATGATATGACTGGGGAGACCGGAACTCTTGGTTATATGGCTCCCGAGGTTTTAAATGGAAACCCCTACAACAGGAAATGTGACGTGTACAGTTTTGGAATCTGTTTATGGGAGACATATTGTTGTGACATGCCATATCCCGACCTAAGTTTCTCAGAGATTACTTCAGCTGTTGTTCGCCAGAATTTGAGACCAGAAATGCCAAGATGCTGCCCAAGTTCTCTTGCAAATGTAATGAGGAAATGCTGGGATGCCAGTCCTGATAAGCGGCCAGAGATGGAGGAGGTTGTCTCCATGCTGGAGGCCATCGACACATCCAAAGGTGGAGGCATGATCCCTGGTGATCAGCAGCAGGGTTGTTTATGCTTCCGCAAGCATAGAGGGCCATGA 1167 0.4439 MKESSDGFVRADQIDLKSIDEQLERHLNKVLTIDKKKRVEEQDSTASNVFDHARVHTSSAGNSPVKFKTNFKKQKQDWEIDPSKLIIKSVIARGTFGTVHRGVYDTQDVAVKLLDWGEEGQRTEAEVSSLRAAFIQEVAVWHKLDHPNVTKFIGATMGSAELQIQTDTGLIGMPSNVCCVVVEYLAGGTLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWETYCCDMPYPDLSFSEITSAVVRQNLRPEMPRCCPSSLANVMRKCWDASPDKRPEMEEVVSMLEAIDTSKGGGMIPGDQQQGCLCFRKHRGP* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1310 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Psa4g1310 388 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1310 388 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 382 - -
Psa4g1310 388 Pfam Protein tyrosine and serine/threonine kinase 87 359 IPR001245 GO:0004672|GO:0006468
Psa4g1310 388 Gene3D Transferase(Phosphotransferase) domain 1 186 375 - -
Psa4g1310 388 SMART serkin_6 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1310 388 CDD STKc_MAP3K-like 91 359 - -
Psa4g1310 388 Gene3D Phosphorylase Kinase; domain 1 65 168 - -
Psa4g1310 388 PRINTS Tyrosine kinase catalytic domain signature 182 195 IPR001245 GO:0004672|GO:0006468
Psa4g1310 388 PRINTS Tyrosine kinase catalytic domain signature 220 238 IPR001245 GO:0004672|GO:0006468
Psa4g1310 388 PRINTS Tyrosine kinase catalytic domain signature 286 308 IPR001245 GO:0004672|GO:0006468
Psa4g1310 388 PRINTS Tyrosine kinase catalytic domain signature 330 352 IPR001245 GO:0004672|GO:0006468
Psa4g1310 388 SUPERFAMILY Protein kinase-like (PK-like) 62 359 IPR011009 -
Psa4g1310 388 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1310 Psa-Chr4 92978707 92984748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1310 1 320 MAP Kinase Kinase Kinase AT5G50000 78.086 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa4g1310 PK_Tyr_Ser-Thr 6.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1310 - - gmx:100807921 705.286