Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1305 ATGAATGTTAGTGTGGTGCGTGAGGTGATGAAGTTACAATCAGTTAGGAATTTGATGGAGCCGATTCTAGAGCCCTTGGTTCGTCGAGTGGTTAAGGAGGAAGTTGAATTGGCTCTAAAGAAACATTTGAACAGCTTGAGACAAACCTGTGGAAAGGAGTTGAATACTTCAGAATCAAGAACTTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTCCCTGTCTTTACAGGAGCTCGAATTGAAGGAGAGGACGGCTCGAACTTAAGGATACGTTTAGTTGATGCCTTAACAGGAAAGGTTGTTTGTACAGGACCTGAATCTTCAGCTAAGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAAGTGACATTTGGATGCCGGAAGATTTCAAGAACAATATTGTGAGAGAGAGGGAGGGGAAAAAGCCGCTCCTTACAGGAGAAGTGATTTTATATCTTAAAGACGGGATTTGTATGATGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTCGGTTCAGGCTTGGTGCAAGAGTAGTGGACAATTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGATTCGTTTATCGTCAGGGATCACAGAGGAGAATTGTACAAGAAACACCACCCTCCAAGTCTTTCGGATGAAATTTGGAGACTGGAAAAGATAGGCAAAGATGGAGCTTTCCACAGGCGTTTGAGTCGCGAAAAGATCCGAAGCGTTAAAGATTTTCTCACACTACTCAATCTCGATCCAGCAAAGTTGCGAACTATATTAGGCACTGGGATGTCGGCAAAGATGTGGGAAATAACTGTAGAGCATGCTCGAACCTGCGTCCTTGATACAACAAGGCATGTGTCATCCGCCGCTAATTCTCAACAACCTCGTGTGGTCTTCAATGCTGTGGGACAAGTGACAGGACTGCTCTCCGAATGCGAATATATCACTGTAGATAAGCTGTCTGAAACTGAAAAGGCTGATGCTCAAATATCGGTTCTTTCTGCACTTAGCCAAGGCGATTATACCTCTTTCGAAGACGAAGCCTCCTTAATGGACGGTTATTCCCACTTAACTAATGCACATTACTCCCCGAGCTCTCCGAGAACCGAGGGATCAAGTGCCAACAAGCTTATGGCTTCTCAAAAGATCACAGGATTCAATTACACACAAGAAAGCGCGTCTTCTACTGATATCATGCCGTCCATTTATTCCGTTGGTGGAACTAGTGGCTTGGATGACTATGGTTTGCCAAATTTCGACAGCATCGGCCTTAGATACGATCAGAATCTTGGTTTTCCGCTCCAAGTACCCAACTCTTTGATCTGCGACACAGATTCAATAGTCCATGCTTTCACGGATGAAGATCATCTACAATTTTTCGAGGCTGATCTTCAATCTCAGTGTCAAATTGAAGCAGACTTACAGAGTGCCGTAGATAGCTTCATGCTAGCACCTTCTACCTCTATGGCCAACGGAAAAGCTCGGAGACGATGGAGAAAGGTAGTCAACGTACTAAAATGGTTCATGGTGAGGAAACGACGAAACCAATTATACAGGTAA 1581 0.4364 MNVSVVREVMKLQSVRNLMEPILEPLVRRVVKEEVELALKKHLNSLRQTCGKELNTSESRTLQLQFENSISLPVFTGARIEGEDGSNLRIRLVDALTGKVVCTGPESSAKVEIVVLEGDFEEESDIWMPEDFKNNIVREREGKKPLLTGEVILYLKDGICMMGEISYTDNSSWTRSRRFRLGARVVDNFDGIRIREAKTDSFIVRDHRGELYKKHHPPSLSDEIWRLEKIGKDGAFHRRLSREKIRSVKDFLTLLNLDPAKLRTILGTGMSAKMWEITVEHARTCVLDTTRHVSSAANSQQPRVVFNAVGQVTGLLSECEYITVDKLSETEKADAQISVLSALSQGDYTSFEDEASLMDGYSHLTNAHYSPSSPRTEGSSANKLMASQKITGFNYTQESASSTDIMPSIYSVGGTSGLDDYGLPNFDSIGLRYDQNLGFPLQVPNSLICDTDSIVHAFTDEDHLQFFEADLQSQCQIEADLQSAVDSFMLAPSTSMANGKARRRWRKVVNVLKWFMVRKRRNQLYR* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1305 526 PANTHER CALMODULIN-BINDING PROTEIN 60 A 4 520 - -
Psa4g1305 526 PANTHER OS02G0177800 PROTEIN 4 520 IPR012416 GO:0005516
Psa4g1305 526 Pfam Calmodulin binding protein C-terminal domain 298 346 IPR046829 -
Psa4g1305 526 Pfam Calmodulin binding protein central domain 219 285 IPR046830 -
Psa4g1305 526 Pfam Calmodulin binding protein-like N-terminal domain 62 207 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1305 Psa-Chr4 92543742 92547851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1305 4 333 Calmodulin-binding Proteins AT5G62570 64.048 9.16e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1305 - - ccaj:109807600 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1305 4 92543742 92547851 Psa4g1305 4 92543742 92547851 ECH