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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Psa4g1290
ATGTTTTTTTTTAATTTGACATGGTGCTATGATGGAGCAAGGAGTTTCGTTGTTTGGAATCAACCTGATTTTTCAAAGGAATTGTTGCCCATATTCTTTAAGCATAACAAATTCTCGAGTTTTGTCAGACAACTTAACACCTATGGCTTTAGAAAGGTTGGTCAAGAACAATGGGAATTCACAAATGAAGATTTTGTAAAAGATCTACCAAATCTCATGAAGAATATCCACATGCGCAGACCATATTTTAGCCATTATGTGCCTAATACTCATAGCCAACGGGCGACAACTTCTGGTGTTAGTGTTGCTGCTGCTCCATTAACAGAATCAGAGCGGTGGAATTTTAAAGCTCAGATAGAAAAAATCAGACATGAAAAAGAACAACTACTTATTGAACGTCAGAGGCAGCAAGAAGAGTGGAATCAAAATGAGATGCACTTACATTACTCGAAGGATCGTTTACAACAGTTGGAATTGAATCAACAAAGTTTACTCTCTTCTGTTGGTCAGGTGCTGCCAAAATCCGTGGAAGAGGCAAGTCTCCGGTAA
549
0.3825
MFFFNLTWCYDGARSFVVWNQPDFSKELLPIFFKHNKFSSFVRQLNTYGFRKVGQEQWEFTNEDFVKDLPNLMKNIHMRRPYFSHYVPNTHSQRATTSGVSVAAAPLTESERWNFKAQIEKIRHEKEQLLIERQRQQEEWNQNEMHLHYSKDRLQQLELNQQSLLSSVGQVLPKSVEEASLR*
183
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Psa4g1290
182
PRINTS
Heat shock factor (HSF) domain signature
28
40
IPR000232
GO:0003700|GO:0006355|GO:0043565
Psa4g1290
182
PRINTS
Heat shock factor (HSF) domain signature
41
53
IPR000232
GO:0003700|GO:0006355|GO:0043565
Psa4g1290
182
PANTHER
HEAT STRESS TRANSCRIPTION FACTOR A-4C
12
175
-
-
Psa4g1290
182
PANTHER
HEAT SHOCK TRANSCRIPTION FACTOR
12
175
IPR027725
-
Psa4g1290
182
SMART
hsfneu3
3
79
IPR000232
GO:0003700|GO:0006355|GO:0043565
Psa4g1290
182
Pfam
HSF-type DNA-binding
7
78
IPR000232
GO:0003700|GO:0006355|GO:0043565
Psa4g1290
182
Gene3D
-
5
80
IPR036388
-
Psa4g1290
182
SUPERFAMILY
"Winged helix" DNA-binding domain
7
77
IPR036390
-
Psa4g1290
182
Coils
Coil
119
139
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Psa4g1290
Psa-Chr4
91067726
91070578
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Psa4g1290
14
174
HSF
AT4G18880
52.795
1.04e-49
163
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HSF
Psa4g1290
HSF_DNA-bind
1.1e-19
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Psa4g1290
K09419
-
gmx:100817602
170.244
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