Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1254 ATGATGAACCTTTTTCTTACCAGAGCCGCTAGGGTTTCTTCTCTTACCAAACACAATGCTGTTGCTGCTTTCAATTCGTCTCGGTGTGTCCATTCATTACCACTTGCGGCCACAGTAGAAGCAGAAGAGATATCTGGTGCAAAGCCTGCTGAAGTTTTGAACTTGGTGCAGGGTAAATGGATTGGATCATCAAACTGGAATACAATTCTGGATCCTTTAAATGGAGAGCCATTTATTAAAGTTGCTGAAGTTGAGGAATCAGGCATTCAGCCCTTTGTAGAAAGCTTGTCCAGCTGTCCCAAACATGGTCTACACAATCCCTTTAAGGCACCAGAGAGATATCTTATGTATGGAGACATAACTACTAAGGCAGCTCACATGCTATCACTCCCTAAGGTTACAGATTTCTTTGCAAGGCTAATACAAAGAGTTTCTCCAAAGAGTTATCAGCAGGCATTTTCTGAAGTTTATGTGACGCAAAAATTTCTGGAGAATTTCTGCGGAGATCAGGTTCGCTTCCTGGCTAGGTCTTTTTCAGTACCTGGAAATCATCTTGGACAGCAAAGTCATGGCTTTCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTCCCCCTAGAGATTCCAGTCCTTCAATTAATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTTAAAGTCGATAGCAAGGTGAGCATTGTTATGGAACAAATGCTGCGCCTTCTTCATTCCTGTGGCTTACCTGTAGAGGATGTAGACTTCATAAATTGTGATGGAAAGACAATGAACAAGCTGCTGCTAGAGGCAAATCCAAGAATGACCCTTTTCACGGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGATGACTTGAAGGGCCGTGTTAAATTAGAAGATGCTGGGTTTGACTGGAAAATATTGGGCCCTGATGTTCATCAGGAAGATTACGTTGCATGGGTATGTGACCAGGATGCATATGCATGCAGCGGTCAAAAGTGCTCGGCACAATCATTGTTAATTATGCACGAGAACTGGTCTAAGACTTCCTTGGTATCTAAGTTGAAAGAACTTGCTGAGAGAAGAAAGCTAGCAGACTTGACAATTGGCCCAGTCCTTACTTTTACAACTGATGCGTTGCTAGAACACACAAAAAATTTACTTGAGATACCAGGATCAAAGTTGCTCTTTGGTGGTCAGCCTTTGGAGGATCATACAATTCCACAAATTTATGGTGCTATTAAACCAACTGCAGTTTATGTTCCTCTTGAGGAAATTATGAAGGATAATAAGAATTATGAGCTTGTGACAAAAGAAATATTTGGACCTTTTCAGGTTGTTACTGACTACAAAGACCATCAACTCCCAATTGTGTTGGAGGCTTTGGAAAAAATGCATGCACACTTAACTGCCGCCGTAGTTTCAAACGATCCTTTATTTTTACAAGAAGTGATTGGGAAATCAGTAAATGGCACTACTTACGCAGGTCTAAGAGCAAGAACAACTGGAGCTCCACAAAACCACTGGTTTGGACCTGCTGGTGACCCCAGAGGTGCAGGAATTGGAACACCTGAGGCTATAAAACTTGTATGGTCTTGCCATAGAGAAGTAATTTATGATTATGGACCAGTATCAAAGGATTGGGAAATTCCTCCTTCAACCTGA 1668 0.4209 MMNLFLTRAARVSSLTKHNAVAAFNSSRCVHSLPLAATVEAEEISGAKPAEVLNLVQGKWIGSSNWNTILDPLNGEPFIKVAEVEESGIQPFVESLSSCPKHGLHNPFKAPERYLMYGDITTKAAHMLSLPKVTDFFARLIQRVSPKSYQQAFSEVYVTQKFLENFCGDQVRFLARSFSVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHSCGLPVEDVDFINCDGKTMNKLLLEANPRMTLFTGSSRVAEKLADDLKGRVKLEDAGFDWKILGPDVHQEDYVAWVCDQDAYACSGQKCSAQSLLIMHENWSKTSLVSKLKELAERRKLADLTIGPVLTFTTDALLEHTKNLLEIPGSKLLFGGQPLEDHTIPQIYGAIKPTAVYVPLEEIMKDNKNYELVTKEIFGPFQVVTDYKDHQLPIVLEALEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDYGPVSKDWEIPPST* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1254 555 CDD ALDH_F12_P5CDH 54 543 - -
Psa4g1254 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 496 IPR016163 GO:0016620
Psa4g1254 555 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Psa4g1254 555 SUPERFAMILY ALDH-like 54 522 IPR016161 GO:0016491
Psa4g1254 555 Pfam Aldehyde dehydrogenase family 120 496 IPR015590 GO:0016491
Psa4g1254 555 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 11 554 IPR044638 GO:0004029
Psa4g1254 555 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 11 554 - -
Psa4g1254 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 304 IPR016162 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1254 1 555 Aldehyde Dehydrogenase Gene Family AT5G62530 81.867 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1254 K00294 - gmx:100806579 993.801