Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1233 ATGACAATCTCTTCCACTTTCTCGACTCAAGCAAACGCGCTTCTCAGAAAGAACTTAACCTTCCAGAAACGCAACAACAAGACAAACATTCGCCTCATTCTATTCCCGTTCATCCTCTGCGTCTTTCTCTTTCTCCTCCAACCTTTAATCGACAACCAATTCGATAAACCCCAATTCAAATGCGGTTGCGGTTGTATCAACAACACCACAACGTGTAGCGACTCAGAGAAGCTTTGTGGAATTCAGTATTCCGATCAGAATCAAGTTTTGGCCTGTGCTATTCCTAGTCCACCGGAATGGCCTCCTCTCTTGCAACTTCCGCCCGGAAAGCCGTGGTATCCGCCGGTTTATACCATGCTATTCACAGCTGAGAATCACTCCTTTGGACAGATTGTGTCTGACAATATGTTTCCGACTGTTTTAACTATGGATTACTCTGATATCATGGCTAGTTTGGCATCAAATATGCTGGGATCTGAGGCAAAGCCGGAGAGCAACAATTTTCTTGAACCTGCTTTCACTTCTGATCTTCCCATTTATTATGTACAAACTAAGTGCCCTCAGGACGACCTTCTATTCCCACCAATTTACTCGGTAGGAGGAATTGATGCGCAGCAGTATATGGAAACATTTCCATTCACGATAGCAGGCTTTCACGTGGATATAGAAATCGGATGTGCGGATGGTATAAATTTATGGCGTAACAGTTCTTCTGAGATCAATAATGAGTTATATGAAGGTCATGAAAGAAGTTCCCCACAGCGGATCAATCCAATATTTTCAGCTTTTGATTTTCTAAATTCAAATGAGAACGGATTCAATGCTACTGTATGGTACAAGTCAACCTACAAGGATGTCACTAATTTTGGTCCTACTGCATTGTTGCGAATTCCTCGTTCTGTAAATTTGATATCAAATGCCTACCTGCAATTTCTGCGTGGACCTGGTACCAAAATGTTATTTGAGTTTGTTAAGGAAATGCCAAAATCTGAGACCCCATTTAGGATTGAGATAGCTTCTCTCCTGGGCGGTCTATTCTTTACATGGGTCGTCCTGCAACTCTTTCCGGTTGTTCTGACATCACTGGTTTATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGGGATGGGCCATATTGGATGATTACATATGGTTATTTTCTTGCCTTATCAGTGATCTACATGTTGTGTTTTGTGACATTTGGCTCAGTATTAGGACTGAAATTCTTTACCTTGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAACTTACAAATTACATTGGCATTTCTGTTGGCTTCCTTTTTTTCAAGTGTCAAGACTGCTACAGTAACCGCATATATAGGTATCTTTGGAACCGGGCTATTATCCGGGTTTCTATTCCAATTCTTTATCCAAGATTCGTCATTTCCAAGAGGATGGATCATTTTTATGGAGTTGTATCCCGGGTTTGCTTTATATCGTGGGTTGTATGAGTTTGCACAGTCTGCCACCAGTGGAAGTAATGTGGGGACTGATGGTATGCGGTGGCATGATCTGAGTGATAGCGCAAATGGCATGAAAGAGGTCTTAATTATAATGTTTGCTGAGTGGATAGTAGTACTTTTTGTTGCTTATTACATCGATCAAGTGTTTTCGACAGGAAGTGGAAAAAGGCCACTTTTCTTCTTGAAAGGATTTCAAAAAAAACCTCTTTCATCATGTAAGACGCTCAGTATTCAAAGGCAGGGGTCAAAAGTTTTGGTTCAGATGGAGAAACCAGATGTCATGCAAGAGAGGGAGAAGGTGGAGCAGCTGCTACTTGAGCCAACCATTGATCATGCAATTGTTTGTGACAACCTAAAAAAGTTCTATCCGGGAAGGGATGGAAATCCAGGGAAATTTGCAGTGAGAGAATTGTCCCTTGCTGTGCCTCGAGGGGAATGCTTCGGTATGCTTGGTCCTAATGGGGCCGGGAAGACTTCTTTTATCAGTATGATGATTGGTCTCACTAAGCCAACATCTGGTGCGGCATATGTTCAAGGCCTGGACATAAAAACTCACATGGATGGAATATATACTAGCATGGGAGTATGCCCACAGCATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTACTTTTTTATGGTCGGCTTAAAAATCTTAAAGGTCCCGTCTTGACTCAAGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTCCATGGAGGGGTTGCTGATAAACAATCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCGGGTACTGGATTAGACCCTGCTACAAGAAAATGCCTATGGAATGTTATCAGGCTTGCAAAACGGGATCGTGCGATCATTCTGACCACACATTCTATGGAAGAGGCAGAGGCACTATGTGATCGATTAGGAATATTTGTAAATGCTAGCTTGCAGTGCATTGGAAATCCAAAAGAGCTGAAAGCGAGATATGGAGGAATCTATGTGTTCACAATGACAACATCTTCCGATCACGAGAAGGATGTGGAGAACATTGTACAACAGCTCACCCCAAATGCCAACAAGATATATCATCTCTCTGGTACACAAAAATTCGAGCTGCCAAAAGAGGATGTTAAAATAGCGAATGTATTCCGAGCTGTTGAAGTTGCGAAAAGAAACTTCACTGTTTTTGCATGGGGTTTAGCAGACACCACATTAGAAGATGTCTTTATTAAGGTTGCACGTGAGGCTCATGCATTTGATACCTTGTCGTAA 2823 0.4176 MTISSTFSTQANALLRKNLTFQKRNNKTNIRLILFPFILCVFLFLLQPLIDNQFDKPQFKCGCGCINNTTTCSDSEKLCGIQYSDQNQVLACAIPSPPEWPPLLQLPPGKPWYPPVYTMLFTAENHSFGQIVSDNMFPTVLTMDYSDIMASLASNMLGSEAKPESNNFLEPAFTSDLPIYYVQTKCPQDDLLFPPIYSVGGIDAQQYMETFPFTIAGFHVDIEIGCADGINLWRNSSSEINNELYEGHERSSPQRINPIFSAFDFLNSNENGFNATVWYKSTYKDVTNFGPTALLRIPRSVNLISNAYLQFLRGPGTKMLFEFVKEMPKSETPFRIEIASLLGGLFFTWVVLQLFPVVLTSLVYEKQQKLRIMMKMHGLGDGPYWMITYGYFLALSVIYMLCFVTFGSVLGLKFFTLNDYSIQFVFYFIYINLQITLAFLLASFFSSVKTATVTAYIGIFGTGLLSGFLFQFFIQDSSFPRGWIIFMELYPGFALYRGLYEFAQSATSGSNVGTDGMRWHDLSDSANGMKEVLIIMFAEWIVVLFVAYYIDQVFSTGSGKRPLFFLKGFQKKPLSSCKTLSIQRQGSKVLVQMEKPDVMQEREKVEQLLLEPTIDHAIVCDNLKKFYPGRDGNPGKFAVRELSLAVPRGECFGMLGPNGAGKTSFISMMIGLTKPTSGAAYVQGLDIKTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGPVLTQAVEESLKSLNLFHGGVADKQSGKYSGGMKRRLSVAISLIGDPKVVYMDEPGTGLDPATRKCLWNVIRLAKRDRAIILTTHSMEEAEALCDRLGIFVNASLQCIGNPKELKARYGGIYVFTMTTSSDHEKDVENIVQQLTPNANKIYHLSGTQKFELPKEDVKIANVFRAVEVAKRNFTVFAWGLADTTLEDVFIKVAREAHAFDTLS* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1233 940 Gene3D - 610 884 IPR027417 -
Psa4g1233 940 Pfam ABC-2 family transporter protein 337 549 - -
Psa4g1233 940 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 940 IPR026082 GO:0016021|GO:0055085|GO:0140359
Psa4g1233 940 Pfam ABC transporter 640 783 IPR003439 GO:0005524
Psa4g1233 940 ProSitePatterns ABC transporters family signature. 757 771 IPR017871 GO:0005524
Psa4g1233 940 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 618 855 IPR003439 GO:0005524
Psa4g1233 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 847 IPR027417 -
Psa4g1233 940 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 7 940 - -
Psa4g1233 940 CDD ABC_subfamily_A 622 843 - -
Psa4g1233 940 SMART AAA_5 648 832 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1233 Psa-Chr4 87237612 87243519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1233 594 866 Calmodulin-binding Proteins AT2G36910 22.727 1.43e-11 67.0