Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1221 ATGGGTAAATCACCAGGAAAATGGATCAAAACTGTTCTCTTTGGGAAGAAGTCATCCAAATCAAATATACCAAGAGGAAGAGAGAAGCTTGGTAATCAAAAAGAAGGAGTTGTTACTTCTAAGGTTTCAGAAACTGGTTTGGCTTTAGAGCCAACCACCAATACTATTCCCAGACACGAGGAAGAGCTGGAGCTGGAGAGTAGAGAAGCCGAAAATGTTTTGCCTGGGAATCAAGAAATTGACACATTGGGACCTGTTCATCAAGATGCACCACTTGATCCAGAAATATTGAGGCGGGAGGAGGCAGTTACGAAAGCACAGGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGAGCCCTTAAAGGCATAATAAGGTTACAAGCACTTATTCGTGGGCACTTGGTTAGAAGACAAGCTGTTGTTACATTATGCTGTATGTATGGAATTGTCAAATTACAAGGACTTGTTCGTGGACAAAGAGTTAGACAGTCTGATGTTGGTTTTGAAATTCATGAGAAGTGCAATCTATTAAGACTTCAGGATGACAAACCTGTCAAGCCAGTTGCTATATCTGATAAAATTCTGAAGCTGTCAGCAAATAATTTCATCCGAAAGCTTATTGCTTCTTCTACTACAATAATGGCCCTGCGTTTGCAATATGTCCGCGGTGATCCAAATTCAGTCTTAAGTTGGTTGGAGCGCTGGTCAGCATCTCGTTTTTGGAGGCCAATTCCCCAACCCAAGAAAATCCGGGATACTAAGTTTCAGAAAAAGCAGGGTAATATTGCAACTGGAGATGCTCATACAAGCAAGTCAAAACGTACCCACAGGAAGCTTTCTACTGCAAATTTTGACCAAGCCCCAGCACAAGCTAATCCTGAATTTGAAAAACCAAAACGAAATGTAAGGAAATTTCCAAGCCAGCCCTCTGATCCTGTGCTGGAAAATCCCCAAATTGAGCTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGACTGCAGTCCTGTCAGAAGTTGAATCCGAGACTCAGAAGCCACACCTGGAAAAAGAAACAGTTGCCTCAAGTGGCGGTGTTTCAGAACAAGCGGTCATAAGTTCTAATGAAAGAATCAAGAAGGAAGCAAAGATAATCATTTCTAGTGAGCCAGATATCGGAATTACTGCTGGAGATTTAGTTAGTAAGGAGGAGGTGTTTGACACTCCAAGCAGCTATCAGGTGAATGTGGAATCAAAGCCCTTGACAGATATTACAAGTAAAGATAAAAACATTTCTGATGATGAAATAAAAATTGAGTCCATAGATTTAGTAGAGACTAGCAAAGATGAAAATTCTCACTTAACCAATGGAAGTTTGAGTCACAAGGAAGATCCAACAGGCAGTGAAAATCAGAAACCAATTCGAAAAGCCTCAATTGTAGCTAAGCAGGAACGTGCAGAGAACGGTTCGCATAATAGTCCGACAGTACCGAGTTATATGGCAGCAACTGAATCTGCCAAAGCAAAATTGAGGGCTCAAGGATCCCCGAAAATTGGACAAGATGGAAGTGAGAAAAACAACAATGCTCGGCGACATTCTCTGCCATCTTTAACTAACAGCAAAATCAGTTCGCATTCACCTAGAACACAGAGGCCAGTTCATTCAGGTGGTAAAGGGACCCACAAAGTTGAGAAAGCTGTATCTTCTGTGGTTGGAAATGGAAAGGTAGTTCAAGCAGAATGGAAGAGGTGA 1752 0.4178 MGKSPGKWIKTVLFGKKSSKSNIPRGREKLGNQKEGVVTSKVSETGLALEPTTNTIPRHEEELELESREAENVLPGNQEIDTLGPVHQDAPLDPEILRREEAVTKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKLQGLVRGQRVRQSDVGFEIHEKCNLLRLQDDKPVKPVAISDKILKLSANNFIRKLIASSTTIMALRLQYVRGDPNSVLSWLERWSASRFWRPIPQPKKIRDTKFQKKQGNIATGDAHTSKSKRTHRKLSTANFDQAPAQANPEFEKPKRNVRKFPSQPSDPVLENPQIELEKVKRNLRKVHNPVVETAVLSEVESETQKPHLEKETVASSGGVSEQAVISSNERIKKEAKIIISSEPDIGITAGDLVSKEEVFDTPSSYQVNVESKPLTDITSKDKNISDDEIKIESIDLVETSKDENSHLTNGSLSHKEDPTGSENQKPIRKASIVAKQERAENGSHNSPTVPSYMAATESAKAKLRAQGSPKIGQDGSEKNNNARRHSLPSLTNSKISSHSPRTQRPVHSGGKGTHKVEKAVSSVVGNGKVVQAEWKR* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1221 583 MobiDBLite consensus disorder prediction 348 373 - -
Psa4g1221 583 MobiDBLite consensus disorder prediction 408 583 - -
Psa4g1221 583 MobiDBLite consensus disorder prediction 519 553 - -
Psa4g1221 583 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Psa4g1221 583 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Psa4g1221 583 Gene3D - 98 145 - -
Psa4g1221 583 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Psa4g1221 583 PANTHER IQ-DOMAIN 5-RELATED 1 571 - -
Psa4g1221 583 MobiDBLite consensus disorder prediction 450 464 - -
Psa4g1221 583 SMART iq_5 98 120 IPR000048 GO:0005515
Psa4g1221 583 SMART iq_5 121 142 IPR000048 GO:0005515
Psa4g1221 583 PANTHER PROTEIN IQ-DOMAIN 31 1 571 - -
Psa4g1221 583 MobiDBLite consensus disorder prediction 422 449 - -
Psa4g1221 583 Pfam Protein of unknown function (DUF4005) 483 560 IPR025064 -
Psa4g1221 583 MobiDBLite consensus disorder prediction 250 319 - -
Psa4g1221 583 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Psa4g1221 583 MobiDBLite consensus disorder prediction 485 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1221 Psa-Chr4 86240084 86246430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1221 1 583 IQD Protein Family AT1G74690 44.517 3.41e-129 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1221 - - gmx:100807118 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2785 2 323131245 323135662 Psa4g1221 4 86240084 86246430 ECH
Psa4g1221 4 86240084 86246430 Psa4g1221 4 86240084 86246430 ECH