Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1219 ATGGGGAATCCTTCCTCTGTCAGCTTCTGGACTCAGGCAAACGCACTTCTCAGAAAGAACTTAACCTTCCAGAAACGGAACGTGAAGAGCAACATCCGGCTTATTTTGTTCCCGTTGATCATCTGCGTCTTGCTGGTTCTAGTTCAGATTATAATCGACATCGAATTGCGTAAATCGGAGTTCAAATGTGGCTGCGCCTGTGCTAACAATAAAACAAGATGTGAAGATTCAGAGAAGGTTTGCGGGCCACAGTATTCCGATCAGATTCAAGTTCCAACATGCCCCATTTCTAACCCAGCTGAATGGCCTCCTCTCTTGCAACTTCCTGCCGTGTCATGCAAGCAAAACCGCTCCTCGTGTCATTTTACTACGCTCTTCACCGCCGACAACCACTCCTTTGGACACACTGTGTCTAAAAATATGTTCCCAAGTACCTTAGTTATGAATGACTCTAATATCATGGATAGTTTAGCACCAAATGTGCTGGGATCTGAATCAATGACCACGGACAACAATTTTAATGAACCTGGTTTTACTTTGGCGCTTCCCATTTATTCTTTACAAACTCGGTGCCCTCGAAACAACTCTGGATTCTCATTTGATATGGCAGGCACTACTGGGCAACAAGAAATCAGATGTGCTCGAGGTATAAATCTATGGCAGAACAGTTCTTCCGAGATCAACAATGAGCTATACAAAGGATATAGAAGACCTAACCGAAAAGGAAGGATCAATGAGATAGTTTCAGCTTTTGATTTTCTAAATTCAAATGAGGATGGATTCAATGTTACTGTATGGTACAACTCAACCTACAAGAGTAACATTACTTTTGTTCCTAATGCTTTGTTGCGAATTCCTCGTTCCATAAATCTGGTATCAAATGCTTACCTGCAGTTTCTGAAGGGGCCTGGTACCAAAATGATATTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCCCAATTAGGCTTGAGATAGCTTCCCTCCTGGGCGCGCTGTTCTTTACGTGGGTCGTCCTGCAACTTTTTCCGGTTATTCTGACATCACTGGTTTATGAGAAGCAACAAAAATTAAGAATCATGATGAGAATGCATGGTCTTGGTGATGGGCCGTATTGGATTATTTCATATGGTTATTTTCTTGCCTTATCAACGATCTACATGTTGTGTTTTGTGATATTTGGCTCTGTCTTAGGATTTAAATTCTTCACCTTGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATACAAACTTACAAATTTCACTGGCATTTCTGTTGGCTTCCTTTTTTTCAAATGTTAAAACTGCTACAGTAACCGCATATATAGGCGTCTTTGGAACTGGGCTATTAGCCGGCTTTCTTTTCCAATTTTTAGTTCAAGATCCCTCATTTTCAAGAGGATGGATCATTTGTATGGAGTTGTATCCTGGGTTTGCTTTATATCGCGGGTTGTATGAGTTTGCACAGTCTGCCTCCGGTATCGGTAATTATGGGACTGATGGTATGCGGTGGAAGGATCTGAGTGGTGGCGCCAATGGCATGAAAGAGGTCTTAATTATCATGGTCGCTGAGTGGATAGTAGTGCTTTTTGTTGCTTATTATATCGATCAAGTATTGTCGACAGGAAGTGGAAAAAATCCTCTATTCTTCTTGAGAGGATTTCAGAAAAAACCTCTCCCGTCATTGAAGAAGCCCAGTATTAAAAGGCAAGGATCAAAAGTTTTTGCTCAGATGGAGAAACCCGATGTTATTCGAGAGAGGGAGAAGGTGGAGCAGCTGCTACTTGAACCAACCATTAATCATGCAATTGTTTGTGACAACCTAAAAAAATTCTATCCAGGAAGGGATGGAAACCTAGGGAAATTTGCAGTGAGAGAGTTGTTCCTTGGTGTACCTCGAGGGGAATGCTTCGGTATGCTTGGTCCTAATGGTGCTGGCAAGAGTTCTTTTATCAGTATGATGATTGGCCTCACGAAGCCAACTTCTGGTGCGGCATATGTTCAAGGCCTTGACATAAGAAATCATATGGACGGAATATATACTAGCATGGGAGTATGCCCACAGCATGACTTGCTGTGGGAAAGCTTAACAGGTAGAGAGCACCTACTTTTTTATGGAAGACTTAAAAATCTTACAGGTTCAGTCTTGACTCAAGCGGTAGAAGAATCTTTGAAGAGTTTAAATCTTTACCATGGAAGAATTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTCAGTGTTGCAATTTCATTGATTGGGGACCCCAGTGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCTTCAAGGAGATGCCTATGGAAAGTTATCAAGCATGCTAAGCGGGATCGTGCAATCATTTTGACCACCCATTCGATGGAAGAGGCAGAAGCCTTATCTGATCGATTAGGAATATTTGTAAATGGTACCATGCAGTGCTTAGGAAATCCAAAGGAGCTGAAAGGAAGATATGGAGGAACTTATGTGTTCACAATGACAACATCTTCCGATCACGAGAAGGATGTGGAGAACATGGTACAACAGCTCACCCCAAATGCCAACAAGATATATCATCTCTCTGGTACTCAAAAGTTTGAGCTGCCAAAGGAGGATGTTAAAATAGCGAGTGTATTCCGAGCTGTTGAAGTTGCAAAAAGGAACTTCACTGTTTTTGCATGGGGTTTAGCTGACACCACATTAGAAGATGTCTTTATTAAGGTTGCACGTGAGGCTGAGGGATTTGATACATTGTCGTAA 2787 0.418 MGNPSSVSFWTQANALLRKNLTFQKRNVKSNIRLILFPLIICVLLVLVQIIIDIELRKSEFKCGCACANNKTRCEDSEKVCGPQYSDQIQVPTCPISNPAEWPPLLQLPAVSCKQNRSSCHFTTLFTADNHSFGHTVSKNMFPSTLVMNDSNIMDSLAPNVLGSESMTTDNNFNEPGFTLALPIYSLQTRCPRNNSGFSFDMAGTTGQQEIRCARGINLWQNSSSEINNELYKGYRRPNRKGRINEIVSAFDFLNSNEDGFNVTVWYNSTYKSNITFVPNALLRIPRSINLVSNAYLQFLKGPGTKMIFEFVKEMPKPETPIRLEIASLLGALFFTWVVLQLFPVILTSLVYEKQQKLRIMMRMHGLGDGPYWIISYGYFLALSTIYMLCFVIFGSVLGFKFFTLNDYSIQFVFYFIYTNLQISLAFLLASFFSNVKTATVTAYIGVFGTGLLAGFLFQFLVQDPSFSRGWIICMELYPGFALYRGLYEFAQSASGIGNYGTDGMRWKDLSGGANGMKEVLIIMVAEWIVVLFVAYYIDQVLSTGSGKNPLFFLRGFQKKPLPSLKKPSIKRQGSKVFAQMEKPDVIREREKVEQLLLEPTINHAIVCDNLKKFYPGRDGNLGKFAVRELFLGVPRGECFGMLGPNGAGKSSFISMMIGLTKPTSGAAYVQGLDIRNHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLTGSVLTQAVEESLKSLNLYHGRIADKQAGKYSGGMKRRLSVAISLIGDPSVVYMDEPSTGLDPASRRCLWKVIKHAKRDRAIILTTHSMEEAEALSDRLGIFVNGTMQCLGNPKELKGRYGGTYVFTMTTSSDHEKDVENMVQQLTPNANKIYHLSGTQKFELPKEDVKIASVFRAVEVAKRNFTVFAWGLADTTLEDVFIKVAREAEGFDTLS* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1219 928 Pfam ABC-2 family transporter protein 258 537 - -
Psa4g1219 928 Pfam ABC transporter 631 772 IPR003439 GO:0005524
Psa4g1219 928 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 6 928 - -
Psa4g1219 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 834 IPR027417 -
Psa4g1219 928 Gene3D - 598 873 IPR027417 -
Psa4g1219 928 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 606 843 IPR003439 GO:0005524
Psa4g1219 928 SMART AAA_5 636 820 IPR003593 -
Psa4g1219 928 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 928 IPR026082 GO:0016021|GO:0055085|GO:0140359
Psa4g1219 928 CDD ABC_subfamily_A 610 831 - -
Psa4g1219 928 ProSitePatterns ABC transporters family signature. 745 759 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1219 Psa-Chr4 86175438 86183591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1219 582 854 Calmodulin-binding Proteins AT2G36910 22.378 3.17e-12 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1219 4 86175438 86183591 Psa4g1219 4 86175438 86183591 ECH