Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1212 ATGGTTCACGTTTCATTTTACAGAAATTATGGGAAAACCTTCAAGAAGCCTCGTCGTCCATACGAGAAGGAGCGATTGGATGCTGAGTTGAAGCTCGTCGGAGAGAAGGGTTCTTATCAGGCAAAGGCACATCAGTCCTCTTGGTGGTGGTCGTCCTGGTCGACATTTTGTGTTTCTCTTAGGGTTGGGAGACAGGTGGTGAACATTCCATCATTCATGGTGAGGGTTGATTCACAGAAGCACATTGACTTTTCACTCACCAGTCCTCTTGGTGGTGGTCGTCCTGGTCGTGTGAAGCGAAAGAACCTTAAGGCTGCAGCTAAGAAGGCTTCAGGTGGTGATGGAGATGAGGAGGATGAAGATTAA 366 0.4781 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEKGSYQAKAHQSSWWWSSWSTFCVSLRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNLKAAAKKASGGDGDEEDED* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1212 121 MobiDBLite consensus disorder prediction 87 121 - -
Psa4g1212 121 PANTHER 40S RIBOSOMAL PROTEIN S9-2-LIKE 60 121 - -
Psa4g1212 121 PANTHER 40S RIBOSOMAL PROTEIN S9-2-LIKE 4 38 - -
Psa4g1212 121 PANTHER 30S 40S RIBOSOMAL PROTEIN 60 121 IPR022801 -
Psa4g1212 121 PANTHER 30S 40S RIBOSOMAL PROTEIN 4 38 IPR022801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1212 Psa-Chr4 86039445 86040650 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1212 1 37 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 91.892 5.61e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1212 K02997 - ming:122080595 87.4261