Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1204 ATGAAAATCACCATTCTAGCTTCTACTCTCTTTGTGATCTTCACAACACTTTTCAACCATTCTTCACTTGCTCTCACTCAAGATGGTCAAGCATTGTTGGAGATCAAAAGCACTTGGAATGATACTAAGAATGTTCTTAGCAACTGGCAGGATTTTGATGAGTCTCCTTGTGCATGGACTGGAATCTCATGTCATCCTGATGCTGAACAAAGAGTTCGTTCAATAAATTTGCCGTACATGCAGCTTGGAGGAATAATCTCTCCCAGCATTGGTAAACTCAGTAGATTGCAGAGATTAGCACTTCATCAGAATGGTTTGCATGGAATCATTCCGGTTGAAATTACCAATTGTACTGAGCTTAGAGCCTTGTACTTGAGGGCTAATTATTTCCAAGGAGGCATACCATCGGGCATTGGAAATCTTTCATTTTTGAATATATTGGATGTATCAAGCAATTCATTGAAAGGAGCTATACCTTCCTCTATCGGCCGTCTCTCGCATTTGCAAGTTTTGAACCTGTCCACCAATTTCTTTTCTGGTGAAATCCCCGACATTGGAGTACTAAGCACCTTCCAGAAGAACTCGTTTATTGGAAATTTAGATCTTTGTGGAAGGCAAATTCAAAAGCCATGTCGAACATCACTTGGTTTCCCTGTCGTGATACCGCATGCCGTTAGCGATGAAGCTTCAGTCCCTCCGAAAAGATCTTCTTCGCATTACTTAAAGGCTGTGCTAATCGGGGCAGTGGCAACCTTGGGCCTTGCACTTATCGTAACCCTTTCATTACTCTGGATTCGTTCATCGTCGAAGAAGGAACGAGCTGTTAGGAAATACACAGAAGTCAAGAAACAAGTTGATCCATCAGCAAGTGCTAAACTTATTACGTTCCACGGTGATATGCCATACACATCATCTGAAATCATAGAGAAGCTGGAGTCTCTTGATGAGGAGGATATCGTAGGGTCAGGAGGATTTGGTACTGTTTACCGAATGGTGATGAATGATTGTGGCACATTTGCTGTTAAGAGAATTGACCGAAGCCGTGAAGGGTCGGATCAAGTGTTTGAAAGGGAACTAGAAATCTTAGGGAGCATCAAACACATAAATTTAGTAAATCTTCGCGGTTATTGCAGGCTCCCTTCTTCAAGGCTCCTTATCTATGATTATTTGGCCTTAGGCAGCTTAGATGATCTCTTGCATGAAAATATCGAACGACAACCCTTGAACTGGAATGATCGTCTAAAGATAACCCTTGGTTCTGCCCGGGGTTTGGCATACTTGCACCATGAATGCTCCCCGAAAATTGTGCACCGTGACATAAAATCTAGCAACATCCTTCTTAATGAAAACATGGAGCCTCACATCTCTGATTTTGGTCTTGCAAAGCTCTTGGTCGATGAAGATGCGCATGTTACCACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTATCTTCAAAGTGGGAGAGCGACTGAGAAGTCGGATGTATATAGCTTTGGAGTTCTATTACTCGAACTTGTAACCGGAAAGAGGCCTACGGATCCTTCCTTTGTAAAGAGAGGTTTAAATGTTGTTGGTTGGATGAACACATTATTGAAAGAAAACAGATTGGAAGATGTGGTAGACAGAAGATGCACTGGTGCAGATGCTGAGACTCTTGAAGTGATTTTGGAGCTAGCAGCAAGATGCACCGATTCAAATGCAGATGACCGTCCTTCGATGAACCAAGTATTGCAGTTGCTGGAGCAAGAGGTTATGTCCCCTTGTCCAAGTGAATTTTACGAGTCTCATTCGGATCACTGA 1809 0.4273 MKITILASTLFVIFTTLFNHSSLALTQDGQALLEIKSTWNDTKNVLSNWQDFDESPCAWTGISCHPDAEQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNGLHGIIPVEITNCTELRALYLRANYFQGGIPSGIGNLSFLNILDVSSNSLKGAIPSSIGRLSHLQVLNLSTNFFSGEIPDIGVLSTFQKNSFIGNLDLCGRQIQKPCRTSLGFPVVIPHAVSDEASVPPKRSSSHYLKAVLIGAVATLGLALIVTLSLLWIRSSSKKERAVRKYTEVKKQVDPSASAKLITFHGDMPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYLALGSLDDLLHENIERQPLNWNDRLKITLGSARGLAYLHHECSPKIVHRDIKSSNILLNENMEPHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLKENRLEDVVDRRCTGADAETLEVILELAARCTDSNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1204 602 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Psa4g1204 602 PANTHER RECEPTOR-LIKE PROTEIN 55 2 602 - -
Psa4g1204 602 Gene3D Phosphorylase Kinase; domain 1 273 389 - -
Psa4g1204 602 Gene3D Transferase(Phosphotransferase) domain 1 390 593 - -
Psa4g1204 602 ProSiteProfiles Protein kinase domain profile. 314 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1204 602 PANTHER LRR RECEPTOR-LIKE KINASE 2 602 - -
Psa4g1204 602 SUPERFAMILY L domain-like 25 210 - -
Psa4g1204 602 SUPERFAMILY Protein kinase-like (PK-like) 296 584 IPR011009 -
Psa4g1204 602 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Psa4g1204 602 SMART serkin_6 314 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1204 602 Pfam Protein kinase domain 316 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1204 602 Gene3D Ribonuclease Inhibitor 25 213 IPR032675 -
Psa4g1204 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1204 Psa-Chr4 85671366 85675319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1204 10 592 Receptor kinase-like Gene Family AT2G35620 50.342 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Psa4g1204 Pkinase 9.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1204 - - gmx:100797653 1041.57