Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1190 ATGATGGAAGCGAATGAGCATGACCACGCCACGCGCCTTCGTGTGACAGGAAAATTGTTGACAGTGATAACTGGTTTTGTTGATATGGGATCAGAAAGTATTGCTCCCATGGTTGAGACTTCAAAAAACAGGTCTTGTAAAATGAACCAAGGGAAAGTCCCCAAGAGAATTCACAAGGCCGAAAGAGAGAAAATGAAACGTGAACACTTGAACGAACTCTTTCTTGATCTTGCCAACGCTCTTGATCTCAATGATCCGAACAGTGGAAAGGCTTCTATATTGTGTGAAGCTTCTAAGCTGCTAAAGGATTTGCTCTGTCAGATTCATTCCCTCAAGAAGGAGAACGTCTCTTTGTTGTCTGAATCTCAATATGTGACCGTGGAGAAAAATGAGCTTAAGGAAGAGAATAGTAGCCTAGAAACTCAAATTGAGAAGCTTCAAGGAGAGATACAGGCAAGGATGGTTCATTCTAAACCTGACCTGAATGCACCTCCTCAATTGGAACTTGAGCTGCCAGAGCAGACAAAATTTGCAGGATATGGTCTCCAAATGCCTACCATAGAACCTTCATTGCAGCAAGGACCTGCTGTTTTGGTTGTCCCTTTTCGTCCCGATCTTCAAGCTGCTTTTCCAGCTCCTAACATTACCGATCCAAACCCTACATCTGTTATCAGTAAACCACATGCCAGATATCCCACACCAGCAGATTCATGGCCATTGCAACTGCTTGGAGAGCAACCAACTTCTAGTTAA 753 0.4356 MMEANEHDHATRLRVTGKLLTVITGFVDMGSESIAPMVETSKNRSCKMNQGKVPKRIHKAEREKMKREHLNELFLDLANALDLNDPNSGKASILCEASKLLKDLLCQIHSLKKENVSLLSESQYVTVEKNELKEENSSLETQIEKLQGEIQARMVHSKPDLNAPPQLELELPEQTKFAGYGLQMPTIEPSLQQGPAVLVVPFRPDLQAAFPAPNITDPNPTSVISKPHARYPTPADSWPLQLLGEQPTSS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1190 250 Gene3D - 51 130 IPR036638 GO:0046983
Psa4g1190 250 PANTHER TRANSCRIPTION FACTOR BHLH47 36 249 - -
Psa4g1190 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 120 IPR036638 GO:0046983
Psa4g1190 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 54 104 IPR011598 GO:0046983
Psa4g1190 250 PANTHER TRANSCRIPTION FACTOR BHLH47 36 249 - -
Psa4g1190 250 Coils Coil 101 121 - -
Psa4g1190 250 Coils Coil 129 149 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1190 47 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 50.459 2.93e-60 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1190 - - mtr:MTR_4g108360 358.607