Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa4g1155 | ATGTGTGTCCCATTTACCGGAACGGAAGCATGGACAAGATCACTTGGATATAAGATTGTTGATGAATGGAGACCATGGTTAATCATGATCAAGTTGCAGGGTTTATACAAGGAATGCAACAATCTCACATTTCTGACTATAAAGGGAGCTGGACATACTGTTCCAGAATATAAACCAGAGGAGGCATTGTACTTTTACAAAACTTTTTTGGATGGAACTCCTATATAA | 228 | 0.3816 | MCVPFTGTEAWTRSLGYKIVDEWRPWLIMIKLQGLYKECNNLTFLTIKGAGHTVPEYKPEEALYFYKTFLDGTPI* | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa4g1155 | 75 | Gene3D | - | 1 | 72 | - | - | |
| Psa4g1155 | 75 | PANTHER | CARBOXYPEPTIDASE | 1 | 73 | - | - | |
| Psa4g1155 | 75 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 42 | 59 | IPR033124 | GO:0004185 | |
| Psa4g1155 | 75 | Pfam | Serine carboxypeptidase | 1 | 72 | IPR001563 | GO:0004185|GO:0006508 | |
| Psa4g1155 | 75 | SUPERFAMILY | alpha/beta-Hydrolases | 1 | 75 | IPR029058 | - | |
| Psa4g1155 | 75 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 1 | 73 | IPR001563 | GO:0004185|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa4g1155 | Psa-Chr4 | 82783225 | 82783615 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa4g1155 | 1 | 75 | Calmodulin-binding Proteins | AT2G22960 | 47.368 | 5.97e-20 | 77.0 |