Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1147 ATGGCGCTGTTCAGAAGATTCTTCTACCGGAAGCCGCCGGATCGGCTTTTGGAGATCTCTGAGAGGGTTTATGTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGAGGAAGGTGAATACCGAGTGTATATGGGGGGAGTTGTGGCTCAGCTGCAGGATCACTTTCCGGAAGCTTCTTTCATGGTCTTCAACTTCAGAGAAGGGGAGAGGCGAACCCAAGTTTCAGACATACTCTCTCAGTATGACATGACAGTTATGGAGTACCCTCGACAATACGAGGGTTGTCCTCTTCTGCCTTTAGAGATGATCCATCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCATTGTGAAAGGGGAGGATGGCCTGTACTGGCATTCATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGCGGGGAGCAAAAGACTCTTGAAATGGTCTACAAGCAAGCTCCCAGAGAATTGCTCCACCTTTTAACTCCATTGAACCCGCAACCTTCTCAGTTCAGATATCTCCAGTATATTTCCAGGAGACATCTGGGTTCTGAGTGGCCGCCGTCAGACACACCCTTGTATTTGGATTGTCTGATTCTTAGAGACCTCCCATTATTTGATGGTGGAAAAGGTTGCAGACCTGTTGTGCGTGTTTATGGTCCAGACCCTTCAAAACCTGCCAATAGAAGTTCGAAGCTTCTTTTCTCAACCTCAAACTCCGTAAAGCATGTTCGACACTATCAACAGGCAGAGTGTATGCTTGTGAAAATTGATCTCCGCTGTCGTGTTCAAGGAGATGTGGTTCTTGAGTGCATAGATTTAAAAGAAGATTCTACTGGTGAGGAGACGATGTTTAGAATTATGTTCCATACTGCATTTGTGCGGTCAAATATCTTGATGCTGAGCCGTGATGAAATTGATATTTTGTGGGATGCTAAGGATCAATATCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTGAACACAGTAACGGCGGCGAGTCAAGATGCAAATGAAACAGAAAATACTTCACCGGAGGAATTCTATGAAGTGGAAGAGATTTTCAGCAATGTAGTTGATGTCCAGGAAATTAAGGCAGAGGGTGATTCTCATACTTTTCATAACAATGCAGTGAATGATGGAATTCCTAAAAGGATCTGGAGGGAGGATTCAGATCCTCACGCTTTTCTGGATTGCACACCAGATGATGGGATTCACAAACAGGTTGGAAAGATGGATTCCGGTATTAATGCTGTGAAAGATATCTCTGTTGATGATGTTAACTGCAAGTTAAATGCGAACACGGATTCAGATCCTCAGGCAGTGAAGGACATTGCCATGGATGATGGAGAAATAAAGTCAAATTCCACTGCCATAACTTATGATATGATGATACCTTTGGAAACAAAGGAAATCATTGAGGATGCTGATCGGGGATCAGCAATTATGCAGGACAAATATGATGAAGATAACGAAGCAACAGAAAAGGAATTAGATTACAAGGAAGGGCAGCCTATGCCTGATAGTTCCAAACAAAAATCTGGTAAACTACCTCCATCTACTGCTAAGAAACAAATTCCATCAAACTCAAAGCCAGGAGATACTGTTGGAAAACTAAAGGTTAAAGAAACCACTGCTTTTCAGGCAAAACAAGCTAAACCAACTGCAGTGACGAGGTGGATTCCTTCTAACAAGGGTTCTTACACAAATTCAATGCATGTATATTATCCACCGTCAAGGATTAATAGTGCACCAGCTGGACTGTCAAATATAACCACTTCAAAAGAGAAAATGGACGATATCAAAGCAAGATCCTTACCTGCTCCTTTTGGCTCTGCAGCAGCTGTTTCTACTGACATGAAAAATGACCTGAAAAGTCGGAAGGTGACCACTTCAAAATCTTTCGGCCCAGTTGTATCAGAAATTGATGCAAAATGTCCATTATCCCCGCCATCAGTTAAAGAGACATCTCTTAAGTCAGCAAGTCAAGTACAAGAACAGAGCTCAGAGCAATTGCTACAGCCTCCCGCACGGCATCCTATTCCTCCTCCTCCCCCTCCTCCACCTCCGCCTTTGCCACCACCCTTTACATCATTTAGTAGACAAGACATTAGGGTGAATTTACAGCCTGCAACTTCTCCCCCCCCTCCACCTCCGCCACCACCTCAACCCTCTTGGAAGTCTGTGGCTTCATCAATAGTTGGAGAGAATTGTGGTTCTTTATCACTCTCCCCACCCGCACTTCCCTTTGCAAGCAATGGAATAACATCAAAATTTTCTGAAGTACCTACTGTAGTGGCCCCATCAAGGCCGCCTCCTCCTCCACCACCACCACCACCACCACCACCAATCCTCCCTTCACGGCATGAAGTTTCAACCGTTCCTCCACCACCATCAACAGTACCTCCTGCAAAGCATGGAGTTTCATCAATTCCTCATTCTCCTCCTCCTCCCCCCTCATTTCCTATGTCTTCAACAAACATGTCTCCATTCCCGCCACCTCCAACTACATCTCAAAAAGCTCCACCCCCACCTCCACCTCCACCTCCACCTCATCCACCCTTTGTTAATTCATATTCAAGTTCACCTACACCACCTCTACCTCCAACTCCTTTTCGTAAGGCTCCACCACCTCCGCCTCCACCTCCTTTTGCTAATGCTCCACCACCTCCGCCTCCACCTCCTTTTGCTAATGCTCCACCACCTCCGCCTCCACCTCCTTTTACTAATGCTCCACCAGCAATGCCTCCACCACCACCTCCACCACCACCTTTTACTAGGACTCCACCAGCACCACCCCCACCTCCTCCACCCCCATTTAGTACATCTCAGTCTGCACCCCCTCCTTTTACTAGAGCTCCACCACCCCCACCCCCACCCCCACCTCTTCCTTTGTCTGGTGGATCCCCACCTCCACCTCCTCCAATGTCTAGAGCCCCTCCCCCTCCCCTCCCCAATCACCCCACACCACCACCACCACTTCCGGTGGTCGAGGCCCGCCACCACCACCACCTCCTCCTGGTGCGAGGCCGCCACCTCCACCCCCTCCTCCTGGTGGTCGCGGAATGCCCACCTCCACCCCCTCCTCCTGGTGGTCGAGGAGGCCCGCCTCCACCCCCTCCTCCTGGTGGTCGAGGAGGCCCGCCTCCACCCCCTCCTCCCGGTGGTCGAGGAGGCCCACCTCCTCCACCTTTTTCTGGTGGTGCACCTCCACCACCTCCGCCCTTGGGTTCTAAAGCTGCAAATATTGGCGCTGACCCAAATGGAAGAGGGCGTGGATATGCTCGCCCTGCTGTAGTGGCACCCCGACGATCCTCCTTAAAGCCTTTGCATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAGCCGCAAATTGCACCAGAGTTTGATGTTTCGGAGCTAGAGAAACTTTTCTCTACAAATGTTCCAAAACCCACCGATTCCAAATCTGGAGGGAGGCGCAAGTCTACTGGATCTAAACCTGACAAAGTTCAATTGGTTGACCTAAGGAGGGCCAATAATACAGAAATCATGCTTACTAAGGTTAAGATGCCACTCCCTGATATGATGGCTGCAGTACTAGCTTTGGATGAGTCAGTATTAGATGTTGATCAGGTGGAGAATCTCATTAAGTTTTGTCCTACCAAAGAGGAAATGGAACTTTTGAAGGGATACACCGGCAACAAGGAGAATTTGGGAAAGTGTGAACAGTTTTTTTTGGAGCTGATGAAAGTGCCAAGGGTGGAGTCAAAGTTAAGAGTTTTCGCTTTCAAAATTCAGTTTCAGGCTCAGGTTACCGAATTTAGGAAGAGTTTAAACACGGTTAACTCTGCCTGTGAAGAGGTCCGAAAATCTACCAAACTGAAGGATATCATGAAGAAAATTCTTTTTTTGGGTAATACATTGAATCAGGGAACGGCAAGGGGATCTGCAGTTGGATTTAAGTTGGATAGTCTTTCAAAGCTCACTGACACTCGTGCTTCTAACAATAAGATGACACTAATGCATTATCTCTGCAAGGTGCTAGCTGAAAGGTCGCCTGGACTCCTTGATTTTCACAAAGACCTTGTTAGTCTGGAAGGTGCAACTAAGGTGATGATTTAG 4191 0.4734 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEGEYRVYMGGVVAQLQDHFPEASFMVFNFREGERRTQVSDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLTPLNPQPSQFRYLQYISRRHLGSEWPPSDTPLYLDCLILRDLPLFDGGKGCRPVVRVYGPDPSKPANRSSKLLFSTSNSVKHVRHYQQAECMLVKIDLRCRVQGDVVLECIDLKEDSTGEETMFRIMFHTAFVRSNILMLSRDEIDILWDAKDQYPKDFKAEVLFLDADAVIPDLNTVTAASQDANETENTSPEEFYEVEEIFSNVVDVQEIKAEGDSHTFHNNAVNDGIPKRIWREDSDPHAFLDCTPDDGIHKQVGKMDSGINAVKDISVDDVNCKLNANTDSDPQAVKDIAMDDGEIKSNSTAITYDMMIPLETKEIIEDADRGSAIMQDKYDEDNEATEKELDYKEGQPMPDSSKQKSGKLPPSTAKKQIPSNSKPGDTVGKLKVKETTAFQAKQAKPTAVTRWIPSNKGSYTNSMHVYYPPSRINSAPAGLSNITTSKEKMDDIKARSLPAPFGSAAAVSTDMKNDLKSRKVTTSKSFGPVVSEIDAKCPLSPPSVKETSLKSASQVQEQSSEQLLQPPARHPIPPPPPPPPPPLPPPFTSFSRQDIRVNLQPATSPPPPPPPPPQPSWKSVASSIVGENCGSLSLSPPALPFASNGITSKFSEVPTVVAPSRPPPPPPPPPPPPPILPSRHEVSTVPPPPSTVPPAKHGVSSIPHSPPPPPSFPMSSTNMSPFPPPPTTSQKAPPPPPPPPPPHPPFVNSYSSSPTPPLPPTPFRKAPPPPPPPPFANAPPPPPPPPFANAPPPPPPPPFTNAPPAMPPPPPPPPPFTRTPPAPPPPPPPPFSTSQSAPPPFTRAPPPPPPPPPLPLSGGSPPPPPPMSRAPPPPLPNHPTPPPPLPVVEARHHHHLLLVRGRHLHPLLLVVAECPPPPPPPGGRGGPPPPPPPGGRGGPPPPPPPGGRGGPPPPPFSGGAPPPPPPLGSKAANIGADPNGRGRGYARPAVVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSTNVPKPTDSKSGGRRKSTGSKPDKVQLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMELLKGYTGNKENLGKCEQFFLELMKVPRVESKLRVFAFKIQFQAQVTEFRKSLNTVNSACEEVRKSTKLKDIMKKILFLGNTLNQGTARGSAVGFKLDSLSKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHKDLVSLEGATKVMI* 1397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1147 1396 MobiDBLite consensus disorder prediction 1043 1097 - -
Psa4g1147 1396 Gene3D - 204 336 - -
Psa4g1147 1396 SMART it6_source 701 1396 IPR015425 -
Psa4g1147 1396 Gene3D Protein tyrosine phosphatase superfamily 14 203 IPR029021 -
Psa4g1147 1396 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1116 1396 IPR015425 -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 672 693 - -
Psa4g1147 1396 Gene3D Formin, FH2 domain 1115 1396 IPR042201 -
Psa4g1147 1396 SMART PTEN_C2_2 198 338 IPR014020 -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 633 750 - -
Psa4g1147 1396 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Psa4g1147 1396 CDD PTP_PTEN-like 16 190 - -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 1177 1191 - -
Psa4g1147 1396 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1129 1394 - -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 785 1015 - -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 1167 1191 - -
Psa4g1147 1396 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 695 716 - -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 503 525 - -
Psa4g1147 1396 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 729 745 - -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 780 1016 - -
Psa4g1147 1396 Pfam Formin Homology 2 Domain 1122 1394 IPR015425 -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 526 551 - -
Psa4g1147 1396 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Psa4g1147 1396 MobiDBLite consensus disorder prediction 503 556 - -
Psa4g1147 1396 PANTHER FORMIN-J 1011 1394 - -
Psa4g1147 1396 PANTHER FORMIN-J 1 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1147 Psa-Chr4 82443643 82456374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1147 1 613 FH2 protein (formin) Gene Family AT5G07740 63.548 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1147 - - gmx:100785475 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1147 4 82443643 82456374 Psa4g1147 4 82443643 82456374 ECH