Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1111 ATGATGATAGAAAACTCAACTGGTAAAGGTTATTACAACGAAGCAACAAAGGAAGAGGATGAAAATGGAGCAATGAACATAGAGAAATTCTCCAACAAAGCAGTAACTTCATCAAGACAATGGACATCGTCAAGAAATCCAAGAATTGTGAGAGTGTCACGTTCTTTAGGGGGAAAAGACAGACACAGCAAAGTGTGTACAATCAAAGGATTGAGAGACCGTCGTATTAGGTTGTCTGTACCAACAGCAATTCAGTTATATGATCTTCAAGACAGGCTTGGTTTAAGTCAACCTAGTAAAGTTGTTGATTGGTTACTTGAAGCAACTCAATCTGATATTGATAAGTTACCACCACTTGATTTTAGTACTCAACAACAAACCCTAAGGTATTTGCAGAATCCTCAACAATCAAATTTTTCTCTTGGAAGTGGTTTTTATGATCATCATCAAATTAAAGGTAAAGAACCTGAAAGTTCTGCAGAAAAGGGTAATTATTATAACACAGTTTGTTCTAATTATTCATCAACTGGTTTTCCTTTTCCATATAACAATAACTTGGATCCTTCAAGTACTCTATCATTATCCCAATTTGGAAGCTATCATGGTAGTTTATTTCATCAAAACAGTAATGGAAGTGCTATGCCATTTTCATCTTCTTCTAATTTGACAGTACCTAATTCAGCAGGTAATTCACAGTTACTCTTTTGTCCTCCTTCTATTATGCCATCATCACTTTTTAGTACTACTCAGAATGCTCCATCCATGGAAAGTGATTTTCAAAGACAATTCAACCATGTTCAGATCTTGAATTCCTCATCAACTAGTACTTTCATCCCGTCTCTTCATCTTCCCATCAATTCGCCTTTTAGACGCAATCAAACAATGCCGTTTATAAATTCGAAGCTTCTTGATTCAGATCATAATAACACCAGAAATGGATAG 942 0.3546 MMIENSTGKGYYNEATKEEDENGAMNIEKFSNKAVTSSRQWTSSRNPRIVRVSRSLGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLEATQSDIDKLPPLDFSTQQQTLRYLQNPQQSNFSLGSGFYDHHQIKGKEPESSAEKGNYYNTVCSNYSSTGFPFPYNNNLDPSSTLSLSQFGSYHGSLFHQNSNGSAMPFSSSSNLTVPNSAGNSQLLFCPPSIMPSSLFSTTQNAPSMESDFQRQFNHVQILNSSSTSTFIPSLHLPINSPFRRNQTMPFINSKLLDSDHNNTRNG* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1111 313 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 2 312 - -
Psa4g1111 313 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 312 IPR005333 GO:0003700
Psa4g1111 313 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
Psa4g1111 313 Pfam TCP family transcription factor 58 152 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1111 Psa-Chr4 80703081 80704795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1111 41 121 TCP Transcription Factor Family AT5G60970 85.366 1.07e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Psa4g1111 TCP 2.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1111 - - mtr:MTR_4g109660 412.92