Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1106 ATGATTTTAAACTTAACTCTGACCACTAATCTTAACACACCTCTATATATAACAATTAGGTTGTGCTTTAAGCGACACCATCAAAATTCACATACTATAGTATCATCACTTACACTTCACCGACACAACACAAGCATGTCTCCATGGATGATTGTCTTGATCACAATTGGTGCATCGATTCTCATTTACAAACTCTTAAACCTCATATCAAAGCCTTCCTTACCTCTCCCACCTGGGCCTAAACCATGGCCGATCGTCGGAAACTTGCCTCACATGGGCCCCGTGCCACACCACGCCCTAGCAGCCTTAGCTCTTAAACACGGCCCTCTCATGCACCTCCGTTTGGGTTTCGTCGACGTGATAGTCGCCGCTTCCCGCCCCGTGGCGGAGCAGTTCTTAAAGGTTCACGATGCTAATTTCTCAAGCCGGCCACCGAACTCCGGCGCTAAATACATGGCATATAATTATCAGGATCTGGTGTTTGCTCCGTATGGACCACGGTGGCGTTTATTGAGGAAAATATCGTACGTTCACATGTTTTCTTCTAAGGCTTTGGATGATTTTAGCCATATACGACAGGAAGAGGTTGCGAGATTAATCCGCAATTTGGCAAGTTCAGGATCCAAAGCAGCAAACTTAGGACAACTGCTAAATGTATGCACAACCAACGCATTGGCAAGAGTAATGATAGGACGGCGAGTATTTAACGACGGTAATAGCGGTTGTGATCCTAGGGCTGATGAGTTTAAATCAATGGTTGTTGAGCTTATGGTATTAGCTGGAGTTTTCAACGTTGGTGATTTTGTTCCTGCTTTAGAGTGGTTGGATCTTCAAGGTGTGCAAGCTAAGATGAAGAAATTACACAAAAGGTTTGATGAATTTCTAACCAGCATTATTCAGGATCACGAGGTTTCCAAGAGTGAGAAGCATAATGACTTGTTGAGCAAGTTACTGTCACTAAAAGAAAAAGTTGATGAAGATGAAGACAAACTCAATGATACCCAGATCAAAGCTTTACTCTTGAACATGTTCGCAGCAGGAACAGACACGTCATCAAGCACGACAGAGTGGGCTATTGCTGAACTAATAAGAAACCCTGGACTTATGGTTTCCATTCAAAAAGAGTTGGACACTGTTGTTGGAGCAAACAGGTTGGTTAATGAAATGGACTTGGCTCATCTTCCTTACTTAGAGGCTGTGGTGAAGGAAACGTTTCGACTTCATCCATCTACGCCTCTTTCGCTCCCACGTGTCGCAAATGAGAGTTGTGAGATCTTCAACTATCATATCCCTAAAGGTGCAACTCTGTTGGTTAATGTTTGGGCCATATCACGTGACCCTAAAGAATGGTCCAACCCATTGGAGTTCAAGCCGGAAAGGTTTCTCCCTGGTGGTGAGAAGTTTGATGTTGATATTAAGGGAACTGACTTTGAGGTGATACCGTTTGGTGCTGGACGTAGAATTTGTGCTGGTATGAGTCTTGGACTTAGGATGGTTCAACTTCTCACTGCTACTTTGGTTCATGCATTCGATTGGGAGTTGGAGAATGGGTTATTGCCGGAAAAACTCAACATGGATGAAGCATATGGGCTTACTTTACAAAGGGAAAAGCCTCTTTTGGTCCACCCTCGTCCAAGGCTTGCGCAGCATTTGTACTTGTAA 1662 0.4392 MILNLTLTTNLNTPLYITIRLCFKRHHQNSHTIVSSLTLHRHNTSMSPWMIVLITIGASILIYKLLNLISKPSLPLPPGPKPWPIVGNLPHMGPVPHHALAALALKHGPLMHLRLGFVDVIVAASRPVAEQFLKVHDANFSSRPPNSGAKYMAYNYQDLVFAPYGPRWRLLRKISYVHMFSSKALDDFSHIRQEEVARLIRNLASSGSKAANLGQLLNVCTTNALARVMIGRRVFNDGNSGCDPRADEFKSMVVELMVLAGVFNVGDFVPALEWLDLQGVQAKMKKLHKRFDEFLTSIIQDHEVSKSEKHNDLLSKLLSLKEKVDEDEDKLNDTQIKALLLNMFAAGTDTSSSTTEWAIAELIRNPGLMVSIQKELDTVVGANRLVNEMDLAHLPYLEAVVKETFRLHPSTPLSLPRVANESCEIFNYHIPKGATLLVNVWAISRDPKEWSNPLEFKPERFLPGGEKFDVDIKGTDFEVIPFGAGRRICAGMSLGLRMVQLLTATLVHAFDWELENGLLPEKLNMDEAYGLTLQREKPLLVHPRPRLAQHLYL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1106 553 Pfam Cytochrome P450 77 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 Coils Coil 310 337 - -
Psa4g1106 553 PANTHER FLAVONOID 3'-MONOOXYGENASE 50 544 - -
Psa4g1106 553 SUPERFAMILY Cytochrome P450 77 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 482 491 IPR017972 GO:0005506|GO:0016705
Psa4g1106 553 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS P450 superfamily signature 480 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS P450 superfamily signature 489 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 128 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 479 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PRINTS E-class P450 group I signature 489 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1106 553 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 50 544 - -
Psa4g1106 553 Gene3D Cytochrome P450 69 551 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1106 Psa-Chr4 80487546 80492174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1106 76 552 Cytochrome P450 AT5G07990 69.520 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1106 K05280 - gmx:547475 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1106 4 80487546 80492174 Psa4g1106 4 80487546 80492174 ECH