Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1095 ATGAAAAAGGTTCTCATTCAGAACAATGAGCAGTTGGAGTTGGTCAGGGAGGAGATACGTGTCTCATCACTGTTTAGTCATCCCAATCTCCTGCCGCTTCTTGATCATGCAATCATTTCTGTTAAGCCTACTGCAGAAACATCTTGGAGCCATGAAGCATACTTGTTATTTCCGGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAACAATGAAAGCCAAGAAGGAGCACTATTCTACCTCAGATGTTCTTCAAATATTTCGGCAGCTCTGTGCAGGACTAAAGCACATGCACAATTTAGATCCTCCATATGCACACAATGATGTCAAACCTGGTAATGTTCTCCTAACACACAGAAAAGGACAATCACCACTTGCCATACTGATGGATTTTGGCAGTGCTCGCCCCGCAAGGAAGCAGATTAGCTCCCGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGAGCCCCCGAGCTGTGGGATTGTCCCAGCCATACTGATATAGACGAGAGGACTGATGTTTGGTCACTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCATTTGAATATGCACTCGGGGAGTCTGGTGGAAGTCTACAATTGGCTATTATAAATGCTCAGGTCAAATGGCCAGCTGGACATAAACCTTCATATCCAGACGCATTTCATCAGTTTGTGTCATGGATGCTTCAGCCCCAAACTATGAGGCCCCGGATAGACGATATCATTATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCAATGA 804 0.4453 MKKVLIQNNEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTAETSWSHEAYLLFPVHLDGTLLDNAKTMKAKKEHYSTSDVLQIFRQLCAGLKHMHNLDPPYAHNDVKPGNVLLTHRKGQSPLAILMDFGSARPARKQISSRSEALQLQEWASEHCSAPFRAPELWDCPSHTDIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIINAQVKWPAGHKPSYPDAFHQFVSWMLQPQTMRPRIDDIIIHVDKLIAKFSQ* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1095 267 PANTHER PHOSPHORYLASE KINASE, GAMMA CATALYTIC SUBUNIT-RELATED 1 266 - -
Psa4g1095 267 Pfam Protein kinase domain 6 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1095 267 SUPERFAMILY Protein kinase-like (PK-like) 2 257 IPR011009 -
Psa4g1095 267 Gene3D Transferase(Phosphotransferase) domain 1 1 266 - -
Psa4g1095 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Psa4g1095 267 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1095 267 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 266 - -
Psa4g1095 267 SMART serkin_6 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1095 Psa-Chr4 80091943 80095960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1095 3 221 EF-hand Containing Proteins AT4G04710 26.364 7.44e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Psa4g1095 Pkinase 7.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1095 K08856 - gmx:100803659 508.449