Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1042 ATGGCAATGGAGATCACTGCTATGGCATCACCATCAACGAGACCCTCTCTTCCAACTCCTTCCACCTTCAACAAGCCTCAACATAGACGTATCCACAACATATCATTACCAACTTCAACCACCATTTCACTACTCGCTCTTTTCACCCCTCCAAATGAAGCCAGAGCTGCTGTTACAATCTCCAAGGACCAAATTGTTTCTTCTATCACCCAAGTGGAGCAGACTATTGATCAGGTTCAGGTGGTAGGTTCTGGTTTTTTGGACACAGCACAGCGTGTTGCTGGAGCTATTGGGAATGTTTTGAAGCCTGGCTTCGATACGGCGTTGCCAATTGTGCAGCAGGCTGGTGAAGAGGCTTTGAAAATTGCTTCACCAGCTTTCTCTGAGGCCTCCAGGAAGGCTCAAGAAGCACTTCAAAGTTCTGGTGTTGATACCCAACCTGTTTTCACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAAGTGATTGAAGGTGCCAAGCCAATAGCCTCATCAACCATGGAAACTATAACTTCTTCAGATCCCACTGTGATTGCTGGAACAGCTGGAGCACTATTTGTTGCATATCTCTTGTTTCCTCCTATCTGGTCTGTCATCTCCTTCAATCTTCGCGGTTACAAAGGAGACTTGACACCAGCTCAAACGCTTGATATGTTATGCACACAAAACTATATTTTGATTGATGTACGGACGGAGAAAGATAAGGACAAGGCCGGTATCCCCCGCCTTCCGTCTAGTGCTAAAAACAAGATGGTTGCCATTCCATTGGAAGAAGTGCCAAGCAAGATAAAAGGACTAGTGAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCAGCATTAAAGATTTCATATCTAAAGAAAATCAACAAAGGCTCCAACGTTGTGATCTTGGACTCGTACTCGGACTCAGCAAAGACAGTTGCAAGAACGCTAACGAGGCTTGGATTTAAGAACTCATGGATTGTTGGTGATGGATTTTCTGGAGGCAGAGGATGGTTACAGAGTAGATTAGGAACAGATTCGTATAAGTTTTCGTTTGCAGAGGTGTTGTCGCCATCTAGAATCATTCCTGCAGGTGTTAAAAGTTTTGGAACATCCAGCAGGCAATCTAGTCAGAAGCTTCTTCCAGGAGCTGACTGA 1170 0.4496 MAMEITAMASPSTRPSLPTPSTFNKPQHRRIHNISLPTSTTISLLALFTPPNEARAAVTISKDQIVSSITQVEQTIDQVQVVGSGFLDTAQRVAGAIGNVLKPGFDTALPIVQQAGEEALKIASPAFSEASRKAQEALQSSGVDTQPVFTAAKTVADAAQQTTKVIEGAKPIASSTMETITSSDPTVIAGTAGALFVAYLLFPPIWSVISFNLRGYKGDLTPAQTLDMLCTQNYILIDVRTEKDKDKAGIPRLPSSAKNKMVAIPLEEVPSKIKGLVRNVKRVEAEIAALKISYLKKINKGSNVVILDSYSDSAKTVARTLTRLGFKNSWIVGDGFSGGRGWLQSRLGTDSYKFSFAEVLSPSRIIPAGVKSFGTSSRQSSQKLLPGAD* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1042 389 Gene3D - 217 356 IPR036873 -
Psa4g1042 389 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 196 338 IPR036873 -
Psa4g1042 389 MobiDBLite consensus disorder prediction 1 25 - -
Psa4g1042 389 SMART rhod_4 220 348 IPR001763 -
Psa4g1042 389 CDD RHOD 224 338 - -
Psa4g1042 389 ProSiteProfiles Rhodanese domain profile. 230 351 IPR001763 -
Psa4g1042 389 Coils Coil 273 293 - -
Psa4g1042 389 Pfam Rhodanese-like domain 222 337 IPR001763 -
Psa4g1042 389 MobiDBLite consensus disorder prediction 9 25 - -
Psa4g1042 389 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 1 387 - -
Psa4g1042 389 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 387 IPR044690 GO:0009704|GO:0071277|GO:0090333
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1042 Psa-Chr4 76932011 76935274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1042 1 309 Sulfurtransferasese or Rhodanese AT5G23060 67.846 4.29e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1042 - - gmx:100813363 601.282