Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1034 ATGTCTTCTATTATTTTTATTATTTTTCATTTATTTCTGCAGCTGAGTTGTTTCCGAGTTAACTCGGAGCCGACTCAGGACAAGCAAGCTCTCCTTGCTTTCATTTCACAAACACCACACTCTAACCGTGTTCAATGGAACGCTTCCGATTCCGTTTGTAACTGGGTCGGTGTTCAATGCGACGCTTCAAGTTCCTATGTTTATTCGCTCCGTTTACCCGCCGTTGGACTCGTGGGTCGGGTCCCACCAAACACAATCGGAAGGCTAACGAATCTTCGTGTTCTCAGTCTCCGTTCTAATGGTCTCACCGGCGAGATCCCTTCCGATTTCTCTAATTTGACTTTTCTTCGTAGTATATATCTTCAGAAGAATAAATTCTCCGGTGGATTTCCATCTGGTTTAACTCGGTTAACTCGTTTGACTCGCTTGGATCTCTCTTCCAACAACTTTTCGGGTTCGATACCTTTCTCCATTAACAACTTGACTCACCTCAGTGGTCTCTTCTTGGAGAATAACACCTTCTCCGGTAGCCTTCCAAGCGTTACTGCAAATTTGAACGGCTTTGATGTTTCTAATAACAATCTCAACGGTTCAATCCCCAATACGCTGTCGAAATTCCCTGAAGCTTCCTTCGCCGGAAACATAAATCTCTGTGGTCCACCATTGAAATCGTGTAGCCCGTTTTTTCCAGCGCCGGCACCGTCACCGGGTTCCATTCCACCGGTCATTAAACCTGGGAAGAAATCTAAGAAGCTTTCCACCGGCGCCATTGTTGCAATTGTAGTTGGTTCCGTTCTGTTCGTAGCGTTACTGCTTCTACTCTTATTACTCTGTCTCCGGAAACGTCGCCGGCAACCAGCGAAACCACCTAAGCCAGTTGTCGCGGCGGCTCGCGCTGTGCCTGCAGAAGCTGGAACATCGTCTTCCAAGGACGATATAACCGGTGGTTCGGCCGAAGCAGAGAGGAACAAATTGGTGTTCTTTGAGGGAGGAATATACAGTTTCGATTTGGAAGATTTGCTTAGGGCTTCTGCGGAGGTTTTGGGAAAGGGAAGCGTTGGGACTTCGTATAAGGCGGTGTTGGAAGAAGGAACTACGGTGGTTGTTAAGAGGTTGAAAGATGTTGTTGTAACAAAGAAAGAGTTTGAGATGCAAATGGAGATTCTGGGTAAAATTAAGCATGAGAATGTGGTTCCTCTTAGAGCATTTTACTTCTCTAAAGATGAGAAATTGCTTGTTTATGATTACACGCCCGCTGGTAGCTTATCTGCTCTACTTCACGGTAGCAGAGGATCTGGGCGAACACCGTTAGATTGGGACAACCGAATGAGAATAGCACTGGGAGCATCAAGAGGACTAGCATGCCTCCACGTGTCAGGCAAAGTAGTCCACGGCAACATTAAATCTTCCAACATCCTCCTCCGAGGACCCGACAATGACGCAAGCGTTTCGGATTTTGGACTCAACCCGTTATTCGGAAATGGATCTCCATCAAACCGGGTCGCGGGTTACCGTGCACCGGAAACCCTAGAAACCCGAAAAGTCACCTTCAAGTCTGACGTATACAGCTTCGGCGTATTGCTGTTGGAGCTATTAACAGGAAAAGCACCCAATCAAGCTTCACTAGGCGAAGAAGGAATCGATCTACCGAGGTGGGTCCAATCCGTTGTTCGTGAAGAATGGACCGCAGAGGTTTTTGACGCTGAGTTGATGAGGTTTCATAATATCGAAGAAGAGATGGTTCAGTTGTTGCAGATAGCGATGGCTTGTGTTTCTGTGGTGCCTGATCAGAGACCAAGTATGCAAGACGTGGTGCGCATGATTGAGGATATGAATCGCGGTGAAACGGATGAGGGTCTTCGTCAGTCATCTGATGATCCTTCTAAAGGATCTGAGGGTCATACTCCACCTCAGACAAGGACTCCACCTAGATCGCGCACACCGTAG 1947 0.472 MSSIIFIIFHLFLQLSCFRVNSEPTQDKQALLAFISQTPHSNRVQWNASDSVCNWVGVQCDASSSYVYSLRLPAVGLVGRVPPNTIGRLTNLRVLSLRSNGLTGEIPSDFSNLTFLRSIYLQKNKFSGGFPSGLTRLTRLTRLDLSSNNFSGSIPFSINNLTHLSGLFLENNTFSGSLPSVTANLNGFDVSNNNLNGSIPNTLSKFPEASFAGNINLCGPPLKSCSPFFPAPAPSPGSIPPVIKPGKKSKKLSTGAIVAIVVGSVLFVALLLLLLLLCLRKRRRQPAKPPKPVVAAARAVPAEAGTSSSKDDITGGSAEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYTPAGSLSALLHGSRGSGRTPLDWDNRMRIALGASRGLACLHVSGKVVHGNIKSSNILLRGPDNDASVSDFGLNPLFGNGSPSNRVAGYRAPETLETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPSMQDVVRMIEDMNRGETDEGLRQSSDDPSKGSEGHTPPQTRTPPRSRTP* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1034 648 MobiDBLite consensus disorder prediction 610 628 - -
Psa4g1034 648 PANTHER OS05G0588300 PROTEIN 9 629 - -
Psa4g1034 648 CDD STKc_IRAK 348 611 - -
Psa4g1034 648 Gene3D Phosphorylase Kinase; domain 1 309 416 - -
Psa4g1034 648 SUPERFAMILY L domain-like 26 217 - -
Psa4g1034 648 Pfam Protein kinase domain 345 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1034 648 Gene3D Ribonuclease Inhibitor 184 226 IPR032675 -
Psa4g1034 648 PANTHER OS05G0480400 PROTEIN 9 629 - -
Psa4g1034 648 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Psa4g1034 648 ProSiteProfiles Protein kinase domain profile. 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1034 648 SUPERFAMILY Protein kinase-like (PK-like) 346 608 IPR011009 -
Psa4g1034 648 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Psa4g1034 648 Gene3D Transferase(Phosphotransferase) domain 1 418 629 - -
Psa4g1034 648 MobiDBLite consensus disorder prediction 610 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1034 Psa-Chr4 76706626 76711590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1034 3 629 Receptor kinase-like Gene Family AT5G58300 52.747 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa4g1034 Pkinase 2.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1034 - - gmx:100806857 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1034 4 76706626 76711590 Psa4g1034 4 76706626 76711590 ECH