Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1032 ATGGCAGAAGTAGCCCAACAATTTGAGTTCATGGCCGATGACGCCGGAGCCTTCAAAACTTATACTCAACAAGCCGGTTCCATCCGCAAAAACGGTTACGTCCTCATCAAGGGACGTCCATGCAAGGTTATTGAAGTAGCAACTTCAAAAACGGGAAAGCATGGTCATGCTAAGTGTCACTTTGTTGGGATTGATATGGTCACTGCAGAGAAGCTTGAGGATATTGTGCCTTTTTCCCACAACTGTGATGTTCCCCACGTCGTCTGA 267 0.4682 MAEVAQQFEFMADDAGAFKTYTQQAGSIRKNGYVLIKGRPCKVIEVATSKTGKHGHAKCHFVGIDMVTAEKLEDIVPFSHNCDVPHVV* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1032 88 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 10 87 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Psa4g1032 88 SUPERFAMILY Translation proteins SH3-like domain 16 87 IPR008991 -
Psa4g1032 88 TIGRFAM eIF_5A: translation elongation factor IF5A 20 87 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Psa4g1032 88 Gene3D - 2 86 IPR014722 -
Psa4g1032 88 PANTHER BNAA07G09420D PROTEIN 10 87 - -
Psa4g1032 88 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 51 58 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1032 Psa-Chr4 76614816 76615878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1032 6 87 Eukaryotic Initiation Factors Gene Family AT1G13950 74.390 4.84e-44 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1032 K03263 K02180 gmx:100305991 142.51