Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1030 ATGGCTGGTGGAAGGAGAAGGAGACATCATTTCAGCAAGATCCATGCATTTACATGCGGTAAAGCATCGTTGGAACAAGACGAACATTCACTGATAGGAGGACCTGGTTTCTCTAGGAAAGTTTATTGCAATGATGCAGAACGTGCCATGTCTAGTATTTATAATTACGGCGATAATTACGTTAGAACTACCAAGTATACTTTGGCAACTTTTCTACCTAAATCTTTGTTCGAACAATTCAGAAGAGTTGCAAATTTTTACTTCTTGGTTGTTGCTGTCTTGTCTTTCTCTCCTGTTGCTCCTTATTCTGCTGTCAGCAATGTTATTCCTCTTCTAGTTGTTGTTGCTGCTACTATGGCTAAAGAGTTCATTGAAGATTTTCAGCGGAAAAAACAGGATATAGAGATGAATAACAGAAAAGTGAAGGTTCATGGTGGTGGTGGTGTTTTTGATTATTCTAAATGGAGAGATTTGAGAGTTGGAGATATAGTGAAAGTTGAGAAAGATGAGTATTTTCCTGCTGATCTTATACTTCTTGCGTCGAACTATGATGACTCGATTTGCTATGTCGATACGATGAATCTCGACGGAGAGACGAATCTTAAACTAAAACAAGCATTAGAAGGAACTTCGAATTTGTTAGAAGACTCGAGTTTTCGAGATTTCAAGGCTGTGATACGGTGCGAGGATCCGAATGCGAATTTGTATTCGTTTGTAGGAAGTTTGGAGGTTGGTGAGGATCAACAATTTCCACTTTCACCTCAGCAGTTACTTCTTAGAGACTCTAAGTTGAAGAACACTGATTTTATCTATGGTGTTGTGATTTTTACCGGCCACGATACCAAGGTTATGCAGAATTCTACAGAGCCTCCGTCGAAGAGAAGCAAGATCGAGAAGAGAATGGATAAGGTTATCTACTGTTTGTTCTTTGTGCTGATTTTGGTTTCTTTCATCGGTTCGATTTTCTTCGGGATTTGGACGAAGCAGGATATGAAAAACGGAAGAATGAAGAGATGGTACCTTAGGCCTGATGATACTGAAGTTTTCTATGATCCTGATAGAGCAGTTCTTGCAGCGATTCTTCATTTCTTGACAGCGTTGATGTTGTACGGTTACTTTATTCCGATTTCGTTGTATGTTTCGATTGAAGTTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAGGATTTGAACATGTATTACGAGGAAACGGATAAGCCAGCGCATGCTCGTACGTCGAATTTGAACGAAGAACTCGGTCAAGTTGATACCATACTTTCTGATAAAACAGGAACACTGACTTGCAATTCTATGGAGTTTATCAAGTGTTCTATTGGTGGAGTTGCTTACGGAAGAGGATTTACGGAAGTCGAGCGAGCTTTATCGAAGAGAAAAGATTCCTATTTCGGCCGGAAGTTGAAAGACGAGAACGCTGCTAAGGCTGCTAAATCGAAGTCGAAGATTAAAGGGTTTAACTTCATGGATGAAAGGATCATGAATGGTAATTGGGTGAGACAGCCTAATGCTAATGTGATTCAGAATTTCATAAAGGTTTTGGCTGTATGTCATACCGCGATACCCGAAGTCGATGAAGCAACCGGTAACATTTCGTACGAAGCTGAATCGCCGGACGAGGCTGCTTTTGTCGTAGCAGCCAGAGAATTCGGATTTGAATTTTACGAAAGAACAAATGCAGCTATTTCAGTTCATGAATTAGACCTCGAATCGAACGTGAAATCAGAGAGGTCTTATAACCTTTTGAATGTATTAGAGTTTACGAGTGCACGGAAGCGGATGTCCGTGATCGTAAGAGACTACAATGGGAAACTACTACTACTTAGCAAAGGTGCTGACAGTATCATGTTTGAACTACTTGCAAAGAATGGAAGAGAGTTTGAAGAGCAAACAAAGTATCACATTAACGAGTATGCCGATTCTGGTTTAAGGACATTGATACTCGCGTATCGTGAACTCGACGAGGAAGAGTATAATCAGTTTAACAAAGAGTTGACAGATGCTAAAAACTTAGTGAGTGCAGATCAGGAGCAGATTGTAGAGGATATATTGCAAAACATCGAGAAGGATTTGATTCTTCTCGGTGCTACCGCAGTCGAGGATAAACTACAAGACGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCTGGGATTAAGCTATGGGTTTTGACAGGTGATAAAATGGAAACAGCAATTAATATCGGATATGCTTGTAGTTTGCTTAGACAAGGAATGAAACAAATTGTAATTAATTCAGATACTCCTGAAAATAAATTGCTCGAGAAAATGGAGGACAAATCGGCTTCTGAAGCGGCAATTAAGGCAAGTGTTGTTCGTCAAATAACGGAGGCAAAGGCGTTACTTTCTTCGTCAGACAATAACTCCGAGGCATTGGCTCTGATCATCGACGGAAAGTCTCTTGCTCATGCGTTAGAAGACGATGTAAAGAACTTGTTTCTTGAACTTGCGATTGGCTGCGCGTCTGTTATATGCTGTCGTTCGTCTCCAAAGCAAAAAGCACTTGTTACTAGATTGGTTAAAATGAGACCTGGTAGCACAACTCTAGCTATTGGAGATGGAGCAAATGATGTTGGTATGCTACAAGAAGCGGATATTGGAATCGGTATCAGCGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATCGCGATCGCTCAATTTCGATTTCTAGAACGCTTACTTCTCGTGCACGGACATTGGTGTTACAGAAGAATTTCATCAATGATTTGTTACTTCTTCTACAAGAATATCACTTTCGGCTTCACTTTGTTCTTCTACGAGATGTATACCTCATTCTCAGGCCAACCTGCATACAATGATTGGTTCATGTCATTTTACAATGTATTCTTCACTTCACTTCCTGTTATTGCTTTAGGAGTATTCGATCAAGATGTCTCCTCCAAATTATGTCTCAAGTTTCCATTACTCTACCAAGAAGGTGTGCAAAACGTACTATTCAGCTGGAAACGAATCTCCGGTTGGGCGTTAAACGGAGTAGCAAGTTCCGCGATTATTTTCTTCTTCTGCATCCGCGCGATGGAGCATCAATCCTTTCGCGAAGGCGGCGAAGTTGCTGACTTACAAATTCTTGGCACCACATTGTACACATGTGTTGTATGGGTTGTGAATTGCCAAATGGCATTATCCATAACCTACTTCACATACATCCAACATATTTTCATATGGGGAAGCATTTTCATGTGGTACATTTTCCTCATGGCCTATGGAGCTATAGACCCTTCAATATCCACAACTGCATATAACGTCTTCATTGAAGCATGTGCACCATCACCATCTTATTGGGTTGTAACTTTCCTTGTTCTTGTTGCTGCATTGCTTCCGTATTTCGCGTACTCGACGATTCAACTCCGGTTCTTTCCGGTGTATCATCAAATGATACAATGGATAAGGAAAGACGGACAAGTGAATGATCCTGAGTTCTGTGACATGGTGAGACAGAGATCGATAAGACATACGACAGTTGGTTTCACGGCTCGTTTGGAAGCTTCTAGACGGTTTGAAGCTTCTAGAAGGTCCGAAATATCGTTGGTACCGTTGGATGGGAAATCAGGAGACAATCAATAA 3627 0.4092 MAGGRRRRHHFSKIHAFTCGKASLEQDEHSLIGGPGFSRKVYCNDAERAMSSIYNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVVAVLSFSPVAPYSAVSNVIPLLVVVAATMAKEFIEDFQRKKQDIEMNNRKVKVHGGGGVFDYSKWRDLRVGDIVKVEKDEYFPADLILLASNYDDSICYVDTMNLDGETNLKLKQALEGTSNLLEDSSFRDFKAVIRCEDPNANLYSFVGSLEVGEDQQFPLSPQQLLLRDSKLKNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSKIEKRMDKVIYCLFFVLILVSFIGSIFFGIWTKQDMKNGRMKRWYLRPDDTEVFYDPDRAVLAAILHFLTALMLYGYFIPISLYVSIEVVKVLQSIFINQDLNMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIGGVAYGRGFTEVERALSKRKDSYFGRKLKDENAAKAAKSKSKIKGFNFMDERIMNGNWVRQPNANVIQNFIKVLAVCHTAIPEVDEATGNISYEAESPDEAAFVVAAREFGFEFYERTNAAISVHELDLESNVKSERSYNLLNVLEFTSARKRMSVIVRDYNGKLLLLSKGADSIMFELLAKNGREFEEQTKYHINEYADSGLRTLILAYRELDEEEYNQFNKELTDAKNLVSADQEQIVEDILQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGYACSLLRQGMKQIVINSDTPENKLLEKMEDKSASEAAIKASVVRQITEAKALLSSSDNNSEALALIIDGKSLAHALEDDVKNLFLELAIGCASVICCRSSPKQKALVTRLVKMRPGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEMYTSFSGQPAYNDWFMSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNVLFSWKRISGWALNGVASSAIIFFFCIRAMEHQSFREGGEVADLQILGTTLYTCVVWVVNCQMALSITYFTYIQHIFIWGSIFMWYIFLMAYGAIDPSISTTAYNVFIEACAPSPSYWVVTFLVLVAALLPYFAYSTIQLRFFPVYHQMIQWIRKDGQVNDPEFCDMVRQRSIRHTTVGFTARLEASRRFEASRRSEISLVPLDGKSGDNQ* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1030 1208 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 1141 IPR023298 -
Psa4g1030 1208 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Psa4g1030 1208 Pfam Cation transport ATPase (P-type) 535 623 - -
Psa4g1030 1208 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 829 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa4g1030 1208 CDD P-type_ATPase_APLT_Dnf-like 58 1023 - -
Psa4g1030 1208 Gene3D - 517 674 IPR023299 GO:0000166
Psa4g1030 1208 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 700 IPR023299 GO:0000166
Psa4g1030 1208 Gene3D - 695 903 IPR023214 -
Psa4g1030 1208 SFLD Haloacid Dehalogenase 408 914 - -
Psa4g1030 1208 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Psa4g1030 1208 Coils Coil 656 676 - -
Psa4g1030 1208 SUPERFAMILY HAD-like 421 918 IPR036412 -
Psa4g1030 1208 SFLD p-type atpase 408 914 IPR044492 -
Psa4g1030 1208 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Psa4g1030 1208 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Psa4g1030 1208 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1186 - -
Psa4g1030 1208 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Psa4g1030 1208 Gene3D - 115 288 - -
Psa4g1030 1208 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Psa4g1030 1208 PRINTS P-type cation-transporting ATPase superfamily signature 749 759 - -
Psa4g1030 1208 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Psa4g1030 1208 Pfam E1-E2 ATPase 136 347 - -
Psa4g1030 1208 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1030 Psa-Chr4 76601482 76606623 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1030 10 1195 Primary Pumps ATPases AT3G25610 69.891 0.0 1759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1030 K01530 K14802 gmx:100799312 2023.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1030 4 76601482 76606623 Psa4g1030 4 76601482 76606623 ECH