Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1026 ATGGGGAGCGACAGTGAAGGTGAGAAATCGGTGCAGAGAGAGAAGGAGAGGAAGAAGATACTTGCTTTAGCTCCCATTGCAAAACCTCTCGCAGGGAAGAAGCTTTCCAAAAGAACACTGAAGCTTGTAAAAAAAGCGGCTGAACACAAGTGCATAAAGAGGGGAGTAAAAGAGGTGGTCAAAAGTATAAGGCGTGGTCAAAAAGGAGTATGTGTAATAGCTGGAAACATATCGCCAATTGACGTAATCACTCATGTTCCTATTTTATGTGAAGAGGCTGAAATTCCATATGTATATGTCCCCTCTAAAGAAGACCTTGCAACTGCAGGAGCAACAAAGAGGCCTACATGTTGTGTTTTAGTGATGACCAAACCTTCAAAGGGTGAACTTGCACAAGAGGTTCAAGAGAAACTAAAGTCTGAGTTTGATCAAGTTGCATCTGATATCACTGAGCTTACGACTTCACTGTTTTAA 474 0.4198 MGSDSEGEKSVQREKERKKILALAPIAKPLAGKKLSKRTLKLVKKAAEHKCIKRGVKEVVKSIRRGQKGVCVIAGNISPIDVITHVPILCEEAEIPYVYVPSKEDLATAGATKRPTCCVLVMTKPSKGELAQEVQEKLKSEFDQVASDITELTTSLF* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1026 157 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 40 123 IPR004038 -
Psa4g1026 157 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 156 - -
Psa4g1026 157 PANTHER - 2 156 - -
Psa4g1026 157 PRINTS Ribosomal protein L7A/RS6 family signature 52 66 IPR018492 -
Psa4g1026 157 PRINTS Ribosomal protein L7A/RS6 family signature 71 84 IPR018492 -
Psa4g1026 157 PRINTS Ribosomal protein L7A/RS6 family signature 87 97 IPR018492 -
Psa4g1026 157 PRINTS Ribosomal protein L7A/RS6 family signature 97 111 IPR018492 -
Psa4g1026 157 Gene3D - 17 147 IPR029064 -
Psa4g1026 157 PRINTS High mobility group-like nuclear protein signature 25 38 IPR002415 GO:0003723|GO:0005730
Psa4g1026 157 PRINTS High mobility group-like nuclear protein signature 38 53 IPR002415 GO:0003723|GO:0005730
Psa4g1026 157 PRINTS High mobility group-like nuclear protein signature 55 65 IPR002415 GO:0003723|GO:0005730
Psa4g1026 157 PRINTS High mobility group-like nuclear protein signature 99 111 IPR002415 GO:0003723|GO:0005730
Psa4g1026 157 SUPERFAMILY L30e-like 19 140 IPR029064 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1026 52 143 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 27.174 9.79e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1026 K11129 - twl:119981267 264.233