Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0962 ATGGCCACCACACCTTACAGAGATGAACCTGACTACGACAGCAGCTCCTCCTCCATCACCGTACCAGAATCCACCCGGAGCTGGATGAGTAACCTCAGCTTCGGAAGCCGCCGTCGCAGAAGCTCCGTCTCCGTCTCTTCCACCACCACATACACCTCTTCAACTCTATCTTCCAACGCTAAACCTCACAAGGCAAACCAAATTGCATGGGAAGCCATGAGCCGACTCCGACTCGACAAAGGCCGAGTCGGACTCGACCACTTCCGACTCTTGAAACGGCTCGGAAGTGGCGACATAGGAAATGTGTATCTTTGTCAGATAAGAAACCCGGTGGTGGGTTTGCCGCAGTGTTCGTATGCTATGAAAGTCGTTGATAGAGAAGCACTTGCTATAAGGAAGAAGCTCCAGAGAGCGGAGATGGAGAAGGAGATTTTGCGTATGCTTGATCACCCTTTCTTGCCTACTTTGTATACCGAGTTTGATGCTTCTCATTACTCTTGTTTGGTCATGGAGTTTTGTCCTGGTGGCGATTTATATGCTTCTCGCCAACGCCAACCTGGGAAGCGCTTTTCCTTATCATCCTCTAAGTTTTATGCAGCTGAGACACTATTGGCGCTAGAATATCTACACATGATGGGAATAGTATACAGAGATTTGAAGCCAGAGAATGTTTTAGTAAGAGAAGATGGACACATAATGCTATCAGATTTTGATCTTTCTCTGAAATGCGACGTCGTTCCAAAGCTGTTAAGAACCAAAACAAGGTTAGAACGTAGCATCAAAACTACTACAAAGAGAGCTTCAACGACACCTTCATGCATTTCACCCATGCAACCAGTTTTGTCATGTTTGTTATCATCAACAAGCAAGAAAAAGAAAACAAAAGTTGAAACAGTTATAAGAGAGAATGTTCAAGAGGAGTTTGAGGTTGATCTTGATCCTGATTTTGTAGCGGAACCAATTGAAGCAAGATCAAAATCATTCGTTGGGACGCATGAGTATTTAGCACCAGAAGTTATATTAGGACAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTCGGTGTTTTTCTATACGAGATGTTATATGGTAGAACACCGTTTAAAGGTGAAAACAATGAGAAAACATTGGTTAACATTCTTAAACAGGAACTGTGTTTTCCTAGGATTACTGTGAGTAGTAATTATGAGTTTGAAGAAATGGTGAAAGTTCAAGATCTTATAAGTAAATTGTTGGTGAAGAATCCAAATAAGAGAATTGGAAGTTGTTTGGGTTCTGTTGAGATTAAAAGACATGAGTTTTTCAAAGGTGTTAATTGGGCTTTGATTAGATCAGTTAAACCTCCTGAAGTTCCCAGTGATAAGAACAAGATTAGGAATAGGGTTATGGTGCCTAAATTAAGCAAGAAAGATAGAGATCAACCATTTCAACCTAATCATCGATTTGATTACTTTTAA 1458 0.4163 MATTPYRDEPDYDSSSSSITVPESTRSWMSNLSFGSRRRRSSVSVSSTTTYTSSTLSSNAKPHKANQIAWEAMSRLRLDKGRVGLDHFRLLKRLGSGDIGNVYLCQIRNPVVGLPQCSYAMKVVDREALAIRKKLQRAEMEKEILRMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYASRQRQPGKRFSLSSSKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRTKTRLERSIKTTTKRASTTPSCISPMQPVLSCLLSSTSKKKKTKVETVIRENVQEEFEVDLDPDFVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQELCFPRITVSSNYEFEEMVKVQDLISKLLVKNPNKRIGSCLGSVEIKRHEFFKGVNWALIRSVKPPEVPSDKNKIRNRVMVPKLSKKDRDQPFQPNHRFDYF* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0962 485 Gene3D Phosphorylase Kinase; domain 1 86 172 - -
Psa4g0962 485 PANTHER PROTEIN KINASE PINOID 2 2 485 - -
Psa4g0962 485 Pfam Protein kinase domain 89 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0962 485 Pfam Protein kinase domain 325 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0962 485 PANTHER FLIPPASE KINASE 1-RELATED 2 485 - -
Psa4g0962 485 Coils Coil 121 141 - -
Psa4g0962 485 MobiDBLite consensus disorder prediction 1 20 - -
Psa4g0962 485 SUPERFAMILY Protein kinase-like (PK-like) 69 457 IPR011009 -
Psa4g0962 485 Gene3D Transferase(Phosphotransferase) domain 1 323 453 - -
Psa4g0962 485 Gene3D Transferase(Phosphotransferase) domain 1 173 242 - -
Psa4g0962 485 ProSiteProfiles Protein kinase domain profile. 88 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0962 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Psa4g0962 485 SMART serkin_6 88 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0962 485 CDD STKc_phototropin_like 86 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0962 Psa-Chr4 71192548 71194594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0962 6 485 AGC Kinase Gene Family AT2G26700 58.569 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa4g0962 Pkinase 2.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0962 K08286 - gmx:100777988 752.281