Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0958 ATGGAAGACAGAAAAGTTCATACAATCGCTGTTTTATCAGTGATAACCTTAATAATTGTTATCATCGTTTGTCGTGTTTCCTTAAAACTCTCGAAAGCTTTCTTCCTAATTTGCGGCGCTTCAATCGCGGTGATTCTCGCTGTCTTTTCATGCATACTGATAAGATACCGTTACAACAAAAGAAGAAAAGTGTTGGAACTACAGTTGAAATCAGAAGGAAGAGAGCTTCGAATCGAGTACAGTTTCTTGCGAAAAGTTGCAGGGATTCCAACAAAGTATAGATACAAAGAGCTTGAAGAAGCAACTGATAATTTTCAAGCAATAATCGGTACAGGCTCATCCGCTTCAGTTTTCAAAGGCATTCTAAACGATGGAACTTCAGTTGCGGTGAAAAGAATCCATGGTGATGAAAGAGGTGAGAGAGAATTTAGATCAGAAGTTTCAGCTATTGCTAGTGTTCAACATGTTAATCTTGTGAGACTTTTTGGTTATTGTAATTCTCCGACACCGCCTAGGTATCTTGTTTATGAGTTTATACCAAACGGGTCGTTAGATTGTTGGATTTTTCCGGTGAAGGAAACTAGGAGACGTAGATGTGGTTGTTTGCCTTGGAATTTAAGGTATAATGTTGCTATTGATGTTGCGAAAGCGTTGAGTTATCTTCATCATGATTGTAGATCTAGGATTTTGCATCTTGATGTGAAGCCAGAGAATATTCTTTTGGATGAAGATTATAAAGCACTTGTTGCTGATTTTGGTCTTGCAAAGCTTGTGGGAAAAGACGAGAGTAATGTGATGACAACGATAAGAGGAACTAGAGGTTATTTAGCGCCTGAATGGTTATTAGAACGTGGAATTTCTGAGAAAACTGATATTTATAGTTATGGAATGGTTTTGTTGGAGTTAATTGGAGGGAGAAGGAATGTTTCAAGGGTGGAAGATCCAAGAGATAAGAGTAAGAAAAAGTGGCAATTTTTTCCTAAGATTGTGAATGAGAAACTGAGAGAAGGGAAATTGATGGAGATTGTGGATCAAAGATTGTTGGAAAGTGAGAATTTAGATGAGAATGAGGTGAAAAGGTTGGTGTTTATTGCTTTGTGGTGTATACAAGAGAAACCAAGATTGAGGCCTAGTATGGTTGAAGTTGTGGATATGCTTGAAGGACGTGTGAGAGTTGAGGAGCCACCAGGTACTAGAATGATTCTTGTTGATTTGTTGTCTGTTGATGAAGATGCTGGTGATGATGATAATAATAATCTAGTGAGGTTGTTGACATCTGTGTCTACTCATGTTGATTGTAATACATCTACTTACTCTTTAGGTTCCACTATTTTGTCTGGTAGATAA 1347 0.3764 MEDRKVHTIAVLSVITLIIVIIVCRVSLKLSKAFFLICGASIAVILAVFSCILIRYRYNKRRKVLELQLKSEGRELRIEYSFLRKVAGIPTKYRYKELEEATDNFQAIIGTGSSASVFKGILNDGTSVAVKRIHGDERGEREFRSEVSAIASVQHVNLVRLFGYCNSPTPPRYLVYEFIPNGSLDCWIFPVKETRRRRCGCLPWNLRYNVAIDVAKALSYLHHDCRSRILHLDVKPENILLDEDYKALVADFGLAKLVGKDESNVMTTIRGTRGYLAPEWLLERGISEKTDIYSYGMVLLELIGGRRNVSRVEDPRDKSKKKWQFFPKIVNEKLREGKLMEIVDQRLLESENLDENEVKRLVFIALWCIQEKPRLRPSMVEVVDMLEGRVRVEEPPGTRMILVDLLSVDEDAGDDDNNNLVRLLTSVSTHVDCNTSTYSLGSTILSGR* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0958 448 Pfam Protein kinase domain 107 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0958 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Psa4g0958 448 Gene3D Phosphorylase Kinase; domain 1 69 178 - -
Psa4g0958 448 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Psa4g0958 448 SUPERFAMILY Protein kinase-like (PK-like) 86 387 IPR011009 -
Psa4g0958 448 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 448 - -
Psa4g0958 448 PANTHER RECEPTOR-LIKE KINASE 1 448 - -
Psa4g0958 448 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Psa4g0958 448 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0958 448 SMART serkin_6 103 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0958 Psa-Chr4 70794328 70796580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0958 1 398 Receptor kinase-like Gene Family AT5G20050 65.087 1.29e-180 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa4g0958 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0958 - - gmx:100779485 721.465