LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa4g0941	ATGGCGGCTTTCTTAAGGAAGGTAGCAAGGGCCACTCCGATCTCATTCGGCGCCCATTCCAAATCTTCCCGTACTAATTTCCACATACCCTTCACCGCTATTGCCGCCATTTCCGGCGGATTCTCCTACCTTTACTACTCTGCCTCTCCCAATCTGGTTCACTCAGATCAAATTGGAGATGAGGAAATTAAGCCTAAAAATATCGCACTGATTCCTGATAAATGGGTTGAATTTAAGCTGCAAGACACTGCCAGGGTCAGTCAAAATACTCACTTATACAGGTTTTCGTTCGATCCCACTAAGAAGTTGGGTTTGGATGTTGCTTCTTGCATTCTTACGAGGGCTCCACTGGGACAAGATGCTGAAGAAAAACCAAAATATGTCATTCGTCCGTATACTCCTATATCAGATCCAGAATCTACAGGATATTTTGATTTGTTAATCAAGGTGTATCCCGACGGAAAAATGAGCCAGCATTTTGCAAGCTTAAAACCAGGTGATGTCGTTGAAGTAAAAGGGCCCATTGAAAAGTTTAAATATACCCCTAATATGAAGAAGAATATTGGCATGATTGCCGGCGGCTCAGGAATTACTCCCATGCTTCAAGTAATTGAGGCTATATTGAAGAATTCTGATGACAAAACTCAGATATCATTGCTTTATGCTAATGTCTCCCCAGATGACATACTGCTTAAACAGAAGCTTGACATTCTAGCAGCAACCCACCCGAATCTAAAGATATTCTACACAGTAGACAATCCAACAAAAAATTGGAAAGGAGGTGCAGGTTACATATCGAAGGATATGGCTGTAAAAGGCTTACCTAGTCCTAGCGACGATACTCTTATACTTGTGTGTGGTCCTCCTGGAATGATGAAACATATATCGGGTGAAAAGGCAAAGGACTGGACACAAGGAGAGGTATCTGGCATACTCAAAGAGGCTGGGTACACCGAACAAATGGTTTACAAATTTTGA	978	0.4223	MAAFLRKVARATPISFGAHSKSSRTNFHIPFTAIAAISGGFSYLYYSASPNLVHSDQIGDEEIKPKNIALIPDKWVEFKLQDTARVSQNTHLYRFSFDPTKKLGLDVASCILTRAPLGQDAEEKPKYVIRPYTPISDPESTGYFDLLIKVYPDGKMSQHFASLKPGDVVEVKGPIEKFKYTPNMKKNIGMIAGGSGITPMLQVIEAILKNSDDKTQISLLYANVSPDDILLKQKLDILAATHPNLKIFYTVDNPTKNWKGGAGYISKDMAVKGLPSPSDDTLILVCGPPGMMKHISGEKAKDWTQGEVSGILKEAGYTEQMVYKF*	326

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa4g0941	325	Pfam	Oxidoreductase FAD-binding domain	78	180	IPR008333	-
	Psa4g0941	325	PRINTS	Cytochrome B5 reductase signature	130	137	-	-
	Psa4g0941	325	PRINTS	Cytochrome B5 reductase signature	166	180	-	-
	Psa4g0941	325	PRINTS	Cytochrome B5 reductase signature	189	208	-	-
	Psa4g0941	325	PRINTS	Cytochrome B5 reductase signature	227	238	-	-
	Psa4g0941	325	PRINTS	Cytochrome B5 reductase signature	282	290	-	-
	Psa4g0941	325	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	130	137	IPR001709	GO:0016491
	Psa4g0941	325	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	189	208	IPR001709	GO:0016491
	Psa4g0941	325	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	227	238	IPR001709	GO:0016491
	Psa4g0941	325	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	282	290	IPR001709	GO:0016491
	Psa4g0941	325	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	73	181	IPR017927	GO:0016491
	Psa4g0941	325	Gene3D	-	172	325	IPR039261	-
	Psa4g0941	325	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	43	325	IPR001834	GO:0016491
	Psa4g0941	325	Gene3D	Translation factors	68	171	-	-
	Psa4g0941	325	SUPERFAMILY	Riboflavin synthase domain-like	68	183	IPR017938	-
	Psa4g0941	325	PANTHER	NADH-CYTOCHROME B5 REDUCTASE-LIKE	43	325	-	-
	Psa4g0941	325	CDD	cyt_b5_reduct_like	78	325	-	-
	Psa4g0941	325	Pfam	Oxidoreductase NAD-binding domain	190	296	IPR001433	GO:0016491
	Psa4g0941	325	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	168	295	IPR039261	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa4g0941	Psa-Chr4	65005745	65012577	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa4g0941	64	325	NADPH P450 reductases	AT5G17770	40.909	1.06e-63	201

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa4g0941	K00326		-	gmx:100781191	557.755