Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0936 ATGAACCTCTCTGAAACTGACTCTAATGTGTGCATCTATCATCTCCAATGGGAAATTGAAACTAGAATTTCACACAAGCTATATTCATCCAACAAAAAAATCAATGGGGCACTTATTGGAAGACTCAGTCAGCCATGTGTCAAGTGGAAGCATACCAGGAGATGTCCCATTGGTGATGAATGTCACTTTGCTCATGGAGATGCTGAGGTACAAATTCTCGGTGGAGGCGTTGAAGCTGAAGCTGAGTTGATGAGACCTGATCTTGATGAGGATTCTTCTCTATGA 285 0.4211 MNLSETDSNVCIYHLQWEIETRISHKLYSSNKKINGALIGRLSQPCVKWKHTRRCPIGDECHFAHGDAEVQILGGGVEAEAELMRPDLDEDSSL* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0936 94 ProSiteProfiles Zinc finger C3H1-type profile. 40 68 IPR000571 GO:0046872
Psa4g0936 94 SUPERFAMILY CCCH zinc finger 44 71 IPR036855 GO:0046872
Psa4g0936 94 Gene3D - 43 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0936 Psa-Chr4 64853035 64854662 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Psa4g0936 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0936 - - hbr:110642933 57.3806