Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0903 ATGAACCAGCGCGTGCCTTCCTCTCGAGCGGTTGGACTCGGCCGAGTCAAACCTCAAGCTCCTGGTAACCGCACCATCTTATGTAACGATCGTCAAGCCAATCTTCACCTTCGATTCAAGGGGAATTCAATATCGACTACAAAGTACAACTTTTTCACTTTTTTGCCCAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCTAATCTCTATTTTCTTACAATCTCGATTTTTTCTACCACGCCAATCAGCCCTGTGTCTCCCATCACCAATGTGCTTCCTCTATCTATGGTGCTTCTCCTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTCTTCAAAATGACATGACCATAAACAACAACGTGATAGATGTGTTGCAAGATAAAGAGTGGGTGTCTATACCGTGGAAAAAATTGCAAGTAGGAGACATTGTTAAGGTTAAGCAGGATGGATTCATTCCTGCAGATTTGCTTTTCCTAGCTAGTACAAATGTAGATGGTGTTTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGAAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAATTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATCTAATAATTCAAGATCAAACACTTCCTCTCAGTCCAAATCAACTTCTGCTGCGAGGATGCAGCCTCAGGAATACAGGGCATATTGTTGGAGTTGTTGTTTTCACAGGACATGAAACAAAGGTGATGATGAATGCTATGAATGTTCCGTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTTGCTCTATTTGCAACTCTGTTTGTGATGTGTTTTATAGGAGCTGTAGGCAGTGCTATCTTTGTAAACAAGAAGTATTTCTATTTATATCTTGAATCATCATCAGAAGAGGAGGGCATGTCACAGTTCAATCCAAGAAATAGATTTTTGGTTTTTCTTCTGACTATGTTTACCTTCATCACTTTGTACTCAACAATTATCCCCATTTCACTCTATGTATCGATAGAGATGATCAAATTTATTCAGTCTACTCGATTTATCAACAATGACTTGCACATGTACCATTATGAAACCGACACCCCAGCATTGGCCAGAACTTCAAATCTGAATGAAGAGCTTGGGCAGGTTGAATACATCTTCTCAGACAAAACCGGGACTCTTACACGGAACTTAATGGAGTTCTTCAAGTGCTCAATTGGAGGAGTGGTCTATGGAAATGGTGTAACTGAAACTGAGAAGGGAATAGCAGAGCGCAGGGGCATAAAACTAGAGGAAAATATCTCATCCAATGCAGTGCGAGAGAGGGGTTTCAATTTTGATGATGCTAGGCTTATGGGAGGAGCTTGGAGGAATGAGCCAAATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATTTGCCATACTGTGCTTCCTGAGGGCGAGGAGTTCCCTGATAAGATTAGATATCAAGCTGCATCACCAGATGAGTCTGCTTTGGTTATCGCCGCAAAGAACTTTGGGTTCTTCTTTTACAGACGCACGCCTACAAAGATATATATTCGTGAATCTCATGCTGAGAAGATGGACAAAATTCAAGACCAGTCATATGAGATTTTGAATGTGCTCGAGTTTAACAGTACAAGGAAGCGCCAATCTGTTGTTTGTCGTTATCCAGATGGGAGGCTTGTATTGTACAGTAAGGGTGCTGATAATGTAATCTTTGAGAGATTAGCTGATGGTTCTAATGATATTAAAAAAGTGACTAGGGAGCATTTGGAACAATTTGGATCTGCTGGACTACGCACATTATGCTTGGCGTACAAAGAATTACATCAAGAGGTTTATGAAAGCTGGAATGAGAAGTTCATCCACGCCAAATCCTCTCTAATTGATCGGGAAAAGAAGTTAGATGAGGTTGCAGAACTTATAGAAAAAGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGATGGAGTACCGGCCTGCATAGATATTCTTCAAAGAGCTGGCATAAAAATTTGGGTGCTCACGGGGGACAAAATTGAAACAGCAATCAATATTGCCTATGCTTGCAATTTAATAAACAATGAGATGAAGCAGTTCATTATCAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGGGTCCAAGTAGAAATTGCACGATTTATTAAAGAAGAAGTTATGAAAGAGCTGAAGAAGTGCTTTGAGGAAGTACAGAGCTATTTTAGCTCTCTATCTCGACCAAAATTAGCACTTGTAATTGATGGAAAATGTTTAATGTATGCACTGGATCCAAGTTTGAGAGTCATGCTGCTGAATTTAAGTTTGAATTGCCATGCTGTTGTTTGCTGCAGAGTTTCTCCCTTACAGAAAGCACAGGTTACAACTTTGGTCAAGAATGGTGCACGGAAAATAACACTTGGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGATGGAGGGGATGCAAGCTGTAATGGCTAGTGATTTTGCAATTGCACAGTTTCGTTATCTTGCAGATTTACTTCTTATTCATGGCCGGTGGTCATATCTTCGAATATGCCAGGTGGTGATGTACTTCTTTTACAAGAATCTCACTTTCACTCTCACTCAGTTTTGGTTTAACTTTCAAACTGGGTTTTCTGGCCAAAGATTCTACGATGATTGGTTTCAGTCATTGTATAATGTTTTCTTCACTGCGCTGCCTGTGATCATTGTTGGCCTATTTGATAAGGATGTCAGTGCATCTCTATCCATGAAGTATCCTGAACTATACATGGAGGGAATAAGAAATGTCTTTTTCAAATGGAGAGTTGTTGCTATAAGGGCCTTTCTATCCGTTTACCAGTCTCTAATATTGTTCTATTTTGTGAGTTCTTCGAGTCTAAGTGCTAAAGATTCAGCAGGCAAGATATTTGGACTCTGGGATGTTAGTACTGTGGCCTTCACATGTGTTGTAGTAACTGTTAACTTGCGACTTATTCTATTTTGTAATTCAATCACAAGGTGGCACTACATTAGTGTTGGTGGAAGTATATTAGGATGGTTTATTTTTGTTTTCTTATATTCAGGGATCAGAACTCGTTATGATCGACAGGAGAATGTGTACTTTGTCATATATGTCTTGATGAGTACAGCGTATTTCTACATTATGCTAATTCTTCTCCCTGTTGCGGCACTTTTTTGTGATTTTCTTTACCATGGGGTTCAGAGATGGTTCTTCCCTTATGATTATCAAATTATTCAAGAACTGCATAGACACGAGAATGATGACTCCGGAAGGAAACAATTGGTAGAGATAGGGAGCCAGCATATTCCAGATGAAGAAAGAAGCGATAGCATATCTCAACTCCCGCGCTCGATATCAAAGCATACCGGTTTTGCGTTTGATTCACCTGGTTATGAGTCATTTTTTGCTTCACAGCTTGGTGTACAAGCCCCTCAAAAGGCCTGGGATGTCGCAAGACGCGCTAGCATGAGATCCAAGACGAAGATTGAGAAAAAATAG 3627 0.4031 MNQRVPSSRAVGLGRVKPQAPGNRTILCNDRQANLHLRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISIFSTTPISPVSPITNVLPLSMVLLLSLIKEAFEDWKRLQNDMTINNNVIDVLQDKEWVSIPWKKLQVGDIVKVKQDGFIPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLIIQDQTLPLSPNQLLLRGCSLRNTGHIVGVVVFTGHETKVMMNAMNVPSKRSTLERKLDKLILALFATLFVMCFIGAVGSAIFVNKKYFYLYLESSSEEEGMSQFNPRNRFLVFLLTMFTFITLYSTIIPISLYVSIEMIKFIQSTRFINNDLHMYHYETDTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVVYGNGVTETEKGIAERRGIKLEENISSNAVRERGFNFDDARLMGGAWRNEPNPDSCKEFFRCLAICHTVLPEGEEFPDKIRYQAASPDESALVIAAKNFGFFFYRRTPTKIYIRESHAEKMDKIQDQSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYSKGADNVIFERLADGSNDIKKVTREHLEQFGSAGLRTLCLAYKELHQEVYESWNEKFIHAKSSLIDREKKLDEVAELIEKDLILIGSTAIEDKLQDGVPACIDILQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREVEDRGVQVEIARFIKEEVMKELKKCFEEVQSYFSSLSRPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTTLVKNGARKITLGIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLIHGRWSYLRICQVVMYFFYKNLTFTLTQFWFNFQTGFSGQRFYDDWFQSLYNVFFTALPVIIVGLFDKDVSASLSMKYPELYMEGIRNVFFKWRVVAIRAFLSVYQSLILFYFVSSSSLSAKDSAGKIFGLWDVSTVAFTCVVVTVNLRLILFCNSITRWHYISVGGSILGWFIFVFLYSGIRTRYDRQENVYFVIYVLMSTAYFYIMLILLPVAALFCDFLYHGVQRWFFPYDYQIIQELHRHENDDSGRKQLVEIGSQHIPDEERSDSISQLPRSISKHTGFAFDSPGYESFFASQLGVQAPQKAWDVARRASMRSKTKIEKK* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0903 1208 PRINTS P-type cation-transporting ATPase superfamily signature 406 420 - -
Psa4g0903 1208 PRINTS P-type cation-transporting ATPase superfamily signature 837 856 - -
Psa4g0903 1208 SFLD p-type atpase 388 888 IPR044492 -
Psa4g0903 1208 Pfam E1-E2 ATPase 122 362 - -
Psa4g0903 1208 Gene3D - 104 269 - -
Psa4g0903 1208 Pfam Phospholipid-translocating P-type ATPase C-terminal 865 1115 IPR032630 -
Psa4g0903 1208 CDD P-type_ATPase_APLT_Dnf-like 41 997 - -
Psa4g0903 1208 SUPERFAMILY Calcium ATPase, transmembrane domain M 30 1115 IPR023298 -
Psa4g0903 1208 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 1204 - -
Psa4g0903 1208 Pfam Phospholipid-translocating ATPase N-terminal 27 90 IPR032631 -
Psa4g0903 1208 ProSitePatterns E1-E2 ATPases phosphorylation site. 408 414 IPR018303 -
Psa4g0903 1208 Gene3D - 667 877 IPR023214 -
Psa4g0903 1208 SUPERFAMILY HAD-like 401 893 IPR036412 -
Psa4g0903 1208 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 810 916 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa4g0903 1208 SFLD Haloacid Dehalogenase 388 888 - -
Psa4g0903 1208 Pfam Cation transport ATPase (P-type) 507 597 - -
Psa4g0903 1208 Gene3D - 516 664 IPR023299 GO:0000166
Psa4g0903 1208 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1204 - -
Psa4g0903 1208 SUPERFAMILY Calcium ATPase, transduction domain A 122 265 IPR008250 -
Psa4g0903 1208 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 413 675 IPR023299 GO:0000166
Psa4g0903 1208 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 39 1123 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0903 Psa-Chr4 60662418 60700924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0903 2 1208 Primary Pumps ATPases AT1G59820 76.738 0.0 1968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0903 K14802 - gmx:100815547 2095.47