Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0892 ATGGATGCCTATACTGTAACTACCTCCATCCTGTTGGTCATGTCCTTATCAGTACCATATACTGGAGCTGAAACACAAAAACAACTACCAGAGCGGATAGCACCAGGTTCCTCACTTTCCCCTACTGGCAGTGATAACAACTCTTTTTGGCTTTCCCGTTCTGGCCTATTTGCTTTTGGCTTTTATACACAAGACAACAATGGCTTTGTCGTTGGAATTTGGTTGCTTGGTAAGATGAACAGGACGATAGTATGGACTGCAAACCGTGATGACCCTCCGGTATCCTCAACTTCAAAGCTACAATTTACCATGAACGGTACAATAATACTCACTGATCAACATGGACAAGAGAAGCTTATTGTTAATGCTAATGCAAGAGCTTCATCTGCCTCCATGCTTGATTCTGGCAACTTTGTAATATATGACTTCAATAATATTTCCAGAGTCATATGGCAGAGTTTCGATTACCCGACTAATACTTTGTTGGGGAGTCAATCTCTACCTTGTGGAGGCCAACTTTACTCTAGTTTATCAGATGCCAACAGCTCAACTGGAAGGTTTCGTCTCAACATGCAGGTTGATGGAAATCTTGTTCTGTATCCAGCATACACTACAGAAATGGGCTGGGATGCTTATTGGTCCTCTGGTACTGTTAGAGCCAATGTCAAATATCATCTTTACCTCAACAAGACAGGTTTACTACAGATCTTAGATAGCAGCCGTGATTCTAGTCATATTACCACTTTGTTTGATGCAGAAAAACACCAGCAGAAGACGGGAGGAAACCAAACTATTTATCGTGCAACCCTGGATTTTGATGGGGTTTTTCGCCTGTATGCTCATCCAAATAATAATGCAAGTTACAAAATGATCACAAGTTGGCCCGGGAATAACCCATGTGAAGTAAAGGGGTTTTGTAGCTTCAACAGTTACTGCACATTCAATGACGACAAACCATTATGCAACTGTCTCAAGGGATACAAATTTATAGATGAAAATGAAAAGACTCTTGGTTGCGAAAGGAACTATTCGAAAGTAGAGTGTAGAGGTAATAGTGATGGTGTGGCCTTTTACGACATAGTCCCGATGAACAATATTTTATGGGAGGACCATCCTTATTTTGAGACTAAAGATATGTCTTCGGAACAAGATTGCTCATCTGCTTGTTTGGTTGATTGCAACTGTTGGGCTGCACTGTATGATGGAGAAAGATGCAAGAAACAAGGGTTGCCTTTGAGATATGTCAGAAGGACACATGAAGATGACAAATCGACCACAGCGTTCTTAAAGGTGGGGAAAAACAGCATTGAAAACTGGAAGTGGAATGATACACTCTCCCCCCTACAACCATCACCACCTCCAATCAAGACTACCAGTAACAAAGCAGTGGTGCATATTATTGTTGTTACATCAATATTTACTGTGCTTCTGGTTTCAGCAGTGGTTATATCCTGCCATTACATTTACAAGATTCGGGTATTGAGGTACAAAAGGCTAACGGACACTGGGAACATTGGGCTGAATGAAGATGTGGCTCTGAGAAGGTTTTCATATATCGAGCTGAAAAGGGCAACAAATCAGTTTAAGGAAGAATTGGGTAAGGGATCTTTTGGATCAGTTTACAAAGGGACCTTAAACAAAGGTAAGAGATTGATTGCAGTGAAGAGACTGGAGAAGGTGGTGGAAGAAGGGGAAAGGGAGTTTCAAGCAGAGGTGAGATCCATTGGGAAAACCCACCACAGGAACCTAGTTAGATTGCTGGGTTTTTGTGTTGAGGGTTCGAAAAGGCTTTTGGTTTATGAGTACATGAGCAACAGCTCGCTCGGAAAGCTTCTGTTTGGTGATCAAAGACGTCCAGATTGGAATGAGAGAGTAAGAATAGCACTGGATATTGCAAGAGGAATTTTGTATCTCCATGAAGAGTGTGACGCTCCAATCATTCATTGCGACTTAAAGCCTCAAAACATTTTGATGGATGAGTTTTGGACCGCCAAGATATCGGATTTTGGGCTAGCAAAACTTTTAATGCCGGACCAAACCAGAACGTTCACGATGGCCAGAGGTACAAGAGGGTATATGGCCCCGGAATGGAACAAGAACGTGCCAATATCAGTGAAAACAGATGTTTATAGCTATGGAATAGTGCTGTTGGAAATCTTATGTTGCAGAAGAAACATAGATGTTAATGTCTTGGAACCGGAGGAGGTTCTTCTTTCGGGTTGGGCCTATAAGTGCTTTGTTGCAGGAGAGTTAAATAAGCTTGTTCCTTGGGAAGTCATTGATAACAATGTAATGGAAAATATGATTAAGGTGGCACTGTGGTGTATCCAAGATGACCCTCTTCTCAGGCCAACAATGAAGGGTGTGGTGTTGATGTTAGAAGGGATTACTAATGTAGCAGTTCCTCCTTGTCCAGATTCCACTTCTGCATGA 2433 0.4188 MDAYTVTTSILLVMSLSVPYTGAETQKQLPERIAPGSSLSPTGSDNNSFWLSRSGLFAFGFYTQDNNGFVVGIWLLGKMNRTIVWTANRDDPPVSSTSKLQFTMNGTIILTDQHGQEKLIVNANARASSASMLDSGNFVIYDFNNISRVIWQSFDYPTNTLLGSQSLPCGGQLYSSLSDANSSTGRFRLNMQVDGNLVLYPAYTTEMGWDAYWSSGTVRANVKYHLYLNKTGLLQILDSSRDSSHITTLFDAEKHQQKTGGNQTIYRATLDFDGVFRLYAHPNNNASYKMITSWPGNNPCEVKGFCSFNSYCTFNDDKPLCNCLKGYKFIDENEKTLGCERNYSKVECRGNSDGVAFYDIVPMNNILWEDHPYFETKDMSSEQDCSSACLVDCNCWAALYDGERCKKQGLPLRYVRRTHEDDKSTTAFLKVGKNSIENWKWNDTLSPLQPSPPPIKTTSNKAVVHIIVVTSIFTVLLVSAVVISCHYIYKIRVLRYKRLTDTGNIGLNEDVALRRFSYIELKRATNQFKEELGKGSFGSVYKGTLNKGKRLIAVKRLEKVVEEGEREFQAEVRSIGKTHHRNLVRLLGFCVEGSKRLLVYEYMSNSSLGKLLFGDQRRPDWNERVRIALDIARGILYLHEECDAPIIHCDLKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTMARGTRGYMAPEWNKNVPISVKTDVYSYGIVLLEILCCRRNIDVNVLEPEEVLLSGWAYKCFVAGELNKLVPWEVIDNNVMENMIKVALWCIQDDPLLRPTMKGVVLMLEGITNVAVPPCPDSTSA* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0892 810 ProSitePatterns Protein kinases ATP-binding region signature. 532 555 IPR017441 GO:0005524
Psa4g0892 810 Gene3D Transferase(Phosphotransferase) domain 1 603 801 - -
Psa4g0892 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 26 808 - -
Psa4g0892 810 Gene3D Phosphorylase Kinase; domain 1 494 602 - -
Psa4g0892 810 Gene3D - 172 292 IPR036426 -
Psa4g0892 810 Pfam Protein kinase domain 528 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0892 810 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 808 IPR045874 GO:0004672
Psa4g0892 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 200 IPR036426 -
Psa4g0892 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Psa4g0892 810 ProSiteProfiles Protein kinase domain profile. 526 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0892 810 SMART serkin_6 526 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0892 810 ProSiteProfiles Bulb-type lectin domain profile. 36 153 IPR001480 -
Psa4g0892 810 CDD B_lectin 46 157 IPR001480 -
Psa4g0892 810 Pfam D-mannose binding lectin 82 166 IPR001480 -
Psa4g0892 810 PIRSF SRK 2 810 IPR024171 GO:0004674
Psa4g0892 810 CDD STKc_IRAK 532 796 - -
Psa4g0892 810 SUPERFAMILY Protein kinase-like (PK-like) 512 794 IPR011009 -
Psa4g0892 810 SMART blect_4 36 157 IPR001480 -
Psa4g0892 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 181 280 IPR036426 -
Psa4g0892 810 Gene3D - 28 155 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0892 Psa-Chr4 59426478 59436878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0892 445 799 Receptor kinase-like Gene Family AT1G56120 42.382 1.87e-67 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa4g0892 Pkinase 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0892 - - ahf:112707609 1011.52