Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0891 ATGGCTTCCACCCTTGTTCTGTTTCTACAGTTCTTCTTCATGCTATTTACAATAATAGAAGCCACACACACAACAACTGAAAATAATAACTCAAGTATCATTCCATTGAGGTCTTCACTCTCTCCAAAAGGCAAAAATAGTTCATGGCCATCAATTTCTGGCCATTTTGCTTTCGGATTTTACCCTCAAGGTAGTGGCTTTGCTGTTGGGATATGGTTAGTTAGTCCATCTGCAAACACAACCACTGTTGTGTGGACTGCTAACCGTGATGCTCCAAAAGCCTCCTCCAAATCTATGCTGAATTTGACAGAGCAAGGCCTGCTAATTCAAAGTGGAAGGGGAGATTCACCATACAATATAGACACAAGAGATTCAAATACGGGGTTAGTCTCATGGGCATCTATGCTTGATTGTGGAAACTTTGTGCTTTATGATGATGATTTTAATGTTATATGGCAAAGCTTTGATCACCCAACTGACACCATATTAGGAGGCCAGAATTTGACTATTGGTGGTGCTTTAGTCTCTAGTATTTCCAAATCAGACCATTCTAGTGGATGTTTCTATCTCCCCATGCAAACTGATGGAAACATTGTCGCTTACCCCTCGTACAGCGGATACAGCCAGCAAGATGCTTACTGGGCTTCAAATACTCAGAATCAGATGTACAGTTACCAAAAACTCAGTCTTAACAATCAAGGCTTTCTTTGCGTAAATGAAGGTGGTGGTAGTGATAGGGTATGTTTCAATGATAGCAATAAGCCTAGAAAGAAGTCATCACACAACAACACAACTTCAATCTACCGTGCAACACTTGATGTAGATGGAAACTTGAGATTGTATGAGCACCAATTTCACTGCGAAAATAGCTCTCGTGTGGTAATGTTGTGGCAAGCACTTAATGATACATGTCTAGTGAAGGGGCTTTGCGGGTTGAACAGTTATTGCACCTCCGACTTAAGTGGTGATGCTGTCTGCAAATGTTATCCTGGTTTCATCCTATCCAATACTAAAAGTGTGCCTATGGACTGCATACAGACGCATAGCAAAGACTATTGTGAAAGCAGTGAAGACCGAACCTTGTTGTATAATTTTACTCGCTTTGAGAATATGCATTGGGATGATGTTCCATATTCTGTTATACCCATGATGAAGATGGAAACTTGTGAGAAGGCTTGCGCACGGGATTGTGGTTGCGGGGGAGCGATATATACCAACGGCAATTGCAATAAATATAGGCTTCCACTTATATGGGGAAGGACTCTAAATGATTCTTCTTCCACTGTGTCTGTGGCCTTACTAAAGTCTCCAAAAAATTTCATTAGTATTTCAGCTCCAACCTCAAACGAGACCTACGAGTCTAAGCCTAATGTTGTTGTTGACAACAAGAAAAACTTGATAATGATCTTAGCGCTTACTTTGGGCGTCGTTTCATTGATTTGCTTGGTCATGGCGGTGTCCATTTTCTTAACTTACAGGCGTCAAGTTATTAGGTATGCAATGTTGTCTGAAAGTGAAAAACTTGTATTTACTGAAGAATGTTCCCTGCGTTCGTTTTCTTTTGACGAACTCGTAAAATCAACTGGGCAATTTTCAGAAGAGATAGGGAGAGGATCATTTGGAGTTGTTTATAAAGGTAAAATAGGCAACAATAACAGAAGTATTGCCGTGAAGAGACTGGATGAGAGAATTGCTGAGGAAGGGGAGAGGGAATTCCAAGCTGAAATTACAACCATTGCTCGAACTCATCACAAGAATTTAGTTAAGCTTATTGGTTTCTGCATAGAAGGATCCAAGAAGCTACTTGTTTATGAGTTTGTCAGCAAAGGTTCTCTTGCAAAACTCCTCTTTGAACAAGAAACAAGAATAACTTGGAAGGAGAGAATGAAACTTGCATTGGACGTGGCTAGAGGACTACTGTATCTACACGAAGAGTGTGAAGTACGAATCATCCACTGCAATATAAATCCTCGAAATATACTTCTGGATGAAGCATGGACTGCAAAATTATCTGATTTTGGATTGGCAAGGCTATCAAAGAGGGGACATTCAAGAACTAGAATAGGGGATGATGGCGCAAGCAGGTACTTGGCCCCTGAGTGGCAGAAGGAGGATGCATCAGTATCAGTAAAATCTGACATTTACAGTTTTGGGGTGATATTGTTGGAGATTATTTGTCTGAGAAGAAGTATAGAGATGAATAATGTTTCCTCAGCTGATGAAATCCTTCTATCCAGTTGGGTATATCAACGATTTGCAGCAGGACAATTAAACAAACTTATCAGACATGATGAAAAAGATGCGGATTGGAAGATATTGGAAAGAATGGTGAAGGTCGGGTTATGGTGTGTGCAAAACCACCAATCTCTTCGCCCTACAATGAAGAATGTAATATTGATGTTGGAAGGTTTGAAAGACATTCCAGTTCCTCCATCTCCAACTCGGTTGGTTGAATAG 2457 0.4046 MASTLVLFLQFFFMLFTIIEATHTTTENNNSSIIPLRSSLSPKGKNSSWPSISGHFAFGFYPQGSGFAVGIWLVSPSANTTTVVWTANRDAPKASSKSMLNLTEQGLLIQSGRGDSPYNIDTRDSNTGLVSWASMLDCGNFVLYDDDFNVIWQSFDHPTDTILGGQNLTIGGALVSSISKSDHSSGCFYLPMQTDGNIVAYPSYSGYSQQDAYWASNTQNQMYSYQKLSLNNQGFLCVNEGGGSDRVCFNDSNKPRKKSSHNNTTSIYRATLDVDGNLRLYEHQFHCENSSRVVMLWQALNDTCLVKGLCGLNSYCTSDLSGDAVCKCYPGFILSNTKSVPMDCIQTHSKDYCESSEDRTLLYNFTRFENMHWDDVPYSVIPMMKMETCEKACARDCGCGGAIYTNGNCNKYRLPLIWGRTLNDSSSTVSVALLKSPKNFISISAPTSNETYESKPNVVVDNKKNLIMILALTLGVVSLICLVMAVSIFLTYRRQVIRYAMLSESEKLVFTEECSLRSFSFDELVKSTGQFSEEIGRGSFGVVYKGKIGNNNRSIAVKRLDERIAEEGEREFQAEITTIARTHHKNLVKLIGFCIEGSKKLLVYEFVSKGSLAKLLFEQETRITWKERMKLALDVARGLLYLHEECEVRIIHCNINPRNILLDEAWTAKLSDFGLARLSKRGHSRTRIGDDGASRYLAPEWQKEDASVSVKSDIYSFGVILLEIICLRRSIEMNNVSSADEILLSSWVYQRFAAGQLNKLIRHDEKDADWKILERMVKVGLWCVQNHQSLRPTMKNVILMLEGLKDIPVPPSPTRLVE* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0891 818 Gene3D Phosphorylase Kinase; domain 1 494 606 - -
Psa4g0891 818 ProSitePatterns Protein kinases ATP-binding region signature. 535 558 IPR017441 GO:0005524
Psa4g0891 818 SMART blect_4 40 158 IPR001480 -
Psa4g0891 818 CDD B_lectin 56 158 IPR001480 -
Psa4g0891 818 ProSiteProfiles Protein kinase domain profile. 529 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0891 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Psa4g0891 818 Pfam D-mannose binding lectin 82 170 IPR001480 -
Psa4g0891 818 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 1 816 - -
Psa4g0891 818 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 816 - -
Psa4g0891 818 Gene3D - 29 157 IPR036426 -
Psa4g0891 818 Gene3D - 159 301 IPR036426 -
Psa4g0891 818 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Psa4g0891 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 220 IPR036426 -
Psa4g0891 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 185 284 IPR036426 -
Psa4g0891 818 Pfam Protein tyrosine and serine/threonine kinase 531 799 IPR001245 GO:0004672|GO:0006468
Psa4g0891 818 Gene3D Transferase(Phosphotransferase) domain 1 607 807 - -
Psa4g0891 818 SUPERFAMILY Protein kinase-like (PK-like) 511 802 IPR011009 -
Psa4g0891 818 ProSiteProfiles Bulb-type lectin domain profile. 159 293 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0891 Psa-Chr4 59417348 59420604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0891 475 813 Receptor kinase-like Gene Family AT4G18250 39.316 2.00e-64 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa4g0891 PK_Tyr_Ser-Thr 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0891 - - cam:101496142 1222.22